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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFR28_00239 and PFR28_00240 are separated by 151 nucleotides
PFR28_00240 and PFR28_00241 are separated by 344 nucleotides
PFR28_00241 and PFR28_00242 are separated by 795 nucleotides
PFR28_00242 and PFR28_00243 are separated by 3 nucleotides
PFR28_00239: PFR28_00239 - Nitric oxide reductase transcription regulator NorR2, at 265,129 to 266,685
_00239
PFR28_00240: PFR28_00240 - Flavohemoprotein, at 266,837 to 268,018
_00240
PFR28_00241: PFR28_00241 - Disulfide bond formation protein B, at 268,363 to 268,857
_00241
PFR28_00242: PFR28_00242 - Cytochrome bo(3) ubiquinol oxidase subunit 2, at 269,653 to 270,600
_00242
PFR28_00243: PFR28_00243 - Cytochrome bo(3) ubiquinol oxidase subunit 1, at 270,604 to 272,634
_00243
Group
Condition
PFR28
_00239
PFR28
_00240
PFR28
_00241
PFR28
_00242
PFR28
_00243
carbon source
L-Proline (C) 10 mM
+0.2
-0.1
-3.0
-0.5
-0.3
carbon source
propionate (C) 20 mM
+0.0
-0.2
-2.2
-0.1
-0.7
carbon source
Xanthosine (C)
+0.0
+0.1
-3.3
-0.2
+0.1
carbon source
acetate (C) 30 mM
+0.1
+0.2
-2.9
-0.2
-0.3
carbon source
acetate (C) 30 mM
-0.3
+0.0
-2.1
-0.3
-0.3
carbon source
D-Glucuronic (C) 10 mM
-0.1
+0.1
-2.2
-0.6
-0.1
carbon source
D-Ribose (C) 10 mM
+0.0
+0.2
-3.1
+0.0
+0.0
carbon source
Quinic Acid (C) 10 mM
-0.0
+0.1
-2.5
-0.3
-0.2
carbon source
L-Proline (C) 10 mM
-0.2
-0.0
-1.8
-0.5
-0.3
carbon source
acetate (C) 30 mM
-0.0
+0.0
-2.2
-0.2
-0.3
carbon source
propionate (C) 20 mM
-0.1
+0.0
-2.7
+0.1
+0.0
carbon source
D-Glucosamine Hydrochloride (C) 10 mM
-0.1
-0.0
-2.4
-0.1
-0.1
carbon source
caffeic (C)
+0.2
+0.2
-3.3
+0.2
+0.2
carbon source
4-Guanidinobutyric (C)
+0.2
-0.1
-2.5
-0.1
-0.1
carbon source
D-(+)-Galactosamine (C) 10 mM
-0.2
-0.1
-2.1
-0.1
+0.0
carbon source
D-Mannitol (C) 10 mM
+0.1
-0.1
-2.5
+0.1
-0.0
carbon source
propionate (C) 20 mM
-0.1
+0.0
-2.3
+0.0
+0.1
carbon source
Shikimic Acid (C) 10 mM
+0.1
+0.1
-2.0
-0.5
-0.1
carbon source
D-Mannitol (C) 10 mM
+0.2
+0.1
-2.6
-0.0
+0.1
carbon source
4-Aminobutyric (C) 10 mM
+0.1
+0.1
-2.1
-0.3
+0.1
carbon source
m-Inositol (C) 10 mM
+0.3
-0.1
-2.3
-0.0
-0.0
carbon source
methyl-trans-p-coumarate (C)
+0.0
+0.0
-3.0
+0.3
+0.5
carbon source
butyrate (C) 10 mM
-0.3
+0.1
-2.1
+0.2
+0.2
carbon source
caffeic (C)
+0.1
+0.0
-2.7
+0.4
+0.2
carbon source
caffeic (C)
+0.1
+0.1
-2.5
+0.2
+0.1
carbon source
Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM
+0.1
-0.1
-2.9
+0.4
+0.5
carbon source
methyl-trans-p-coumarate (C)
+0.2
+0.2
-3.1
+0.4
+0.4
carbon source
methyl ferulate (C)
+0.1
-0.0
-2.4
+0.3
+0.3
carbon source
methyl ferulate (C)
+0.3
+0.1
-2.2
+0.5
+0.3
carbon source
methyl-trans-p-coumarate (C)
+0.3
+0.1
-1.8
+0.1
+0.5
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PFR28_00241
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