Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_00180 and PFR28_00181 overlap by 1 nucleotidesPFR28_00181 and PFR28_00182 are separated by 10 nucleotidesPFR28_00182 and PFR28_00183 overlap by 4 nucleotidesPFR28_00183 and PFR28_00184 are separated by 115 nucleotides PFR28_00180: PFR28_00180 - Intermembrane phospholipid transport system permease protein MlaE, at 204,139 to 204,936 _00180 PFR28_00181: PFR28_00181 - Intermembrane phospholipid transport system binding protein MlaD, at 204,936 to 205,403 _00181 PFR28_00182: PFR28_00182 - Intermembrane phospholipid transport system binding protein MlaC, at 205,414 to 206,067 _00182 PFR28_00183: PFR28_00183 - hypothetical protein, at 206,064 to 206,381 _00183 PFR28_00184: PFR28_00184 - hypothetical protein, at 206,497 to 206,736 _00184
Group Condition PFR28_00180 PFR28_00181 PFR28_00182 PFR28_00183 PFR28_00184
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -4.1 -3.8 -4.6 N.D. -2.0
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -5.6 -4.8 -4.4 N.D. +0.7
carbon source propionate carbon 20 mM -4.4 -3.6 -3.3 N.D. -1.6
carbon source octanoate (C) 10 mM -3.5 -3.4 -3.7 N.D. -0.5
carbon source propionate carbon 20 mM -4.0 -2.7 -2.6 N.D. -0.1
carbon source propionate carbon 20 mM -3.1 -3.2 -2.9 N.D. -0.0
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -2.2 -2.9 -2.9 N.D. -0.7
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -2.5 -2.5 -2.3 N.D. -1.0
carbon source p-Coumaric (C) 2.5 mM -3.0 -2.6 -2.8 N.D. +0.3
carbon source p-Coumaric (C) 2.5 mM -2.9 -2.7 -2.3 N.D. +0.0
carbon source octanoate (C) 10 mM -2.6 -2.6 -2.5 N.D. -0.1
carbon source propionate (C) 20 mM -2.6 -2.7 -2.2 N.D. -0.2
carbon source L-Carnitine 10 mM (C) -1.8 -1.8 -1.6 N.D. -2.3
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -2.5 -2.2 -2.3 N.D. -0.5
carbon source L-Carnitine 10 mM (C) -2.5 -1.9 -2.3 N.D. -0.7
carbon source L-Phenylalanine 5 mM (C) -2.0 -2.2 -2.2 N.D. -0.9
carbon source L-Phenylalanine 5 mM (C) -2.2 -2.9 -2.1 N.D. -0.0
carbon source octanoate (C) 10 mM -1.8 -2.6 -2.4 N.D. -0.4
carbon source Trisodium citrate 10 mM (C) -2.0 -2.1 -2.1 N.D. -0.9
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM -1.8 -1.8 -1.9 N.D. -1.2
carbon source octanoate (C) -2.0 -1.4 -2.1 N.D. -1.3
carbon source Ferulic Acid (C) 2.5 mM -2.9 -1.9 -1.7 N.D. -0.2
carbon source p-Coumaric (C) 2.5 mM -2.7 -2.2 -2.3 N.D. +0.6
carbon source L-Carnitine 10 mM (C) -1.8 -1.7 -1.5 N.D. -1.5
carbon source Glycocyamine 10 mM (C) -1.9 -1.6 -1.4 N.D. -1.6
carbon source Trisodium citrate 10 mM (C) -1.6 -2.0 -1.5 N.D. -1.2
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM -2.1 -2.0 -1.9 N.D. -0.3
carbon source Ferulic Acid (C) 2.5 mM -2.5 -2.0 -2.1 N.D. +0.4
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -2.4 -1.3 -1.7 N.D. +0.9
carbon source 4-Guanidinobutyric (C) +1.5 +1.6 +1.8 N.D. -3.4
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