Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_00177 and PFR28_00178 overlap by 1 nucleotidesPFR28_00178 and PFR28_00179 are separated by 276 nucleotidesPFR28_00179 and PFR28_00180 overlap by 1 nucleotidesPFR28_00180 and PFR28_00181 overlap by 1 nucleotides PFR28_00177: PFR28_00177 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC, at 201,555 to 202,079 _00177 PFR28_00178: PFR28_00178 - Arabinose 5-phosphate isomerase KdsD, at 202,079 to 203,053 _00178 PFR28_00179: PFR28_00179 - Intermembrane phospholipid transport system ATP-binding protein MlaF, at 203,330 to 204,139 _00179 PFR28_00180: PFR28_00180 - Intermembrane phospholipid transport system permease protein MlaE, at 204,139 to 204,936 _00180 PFR28_00181: PFR28_00181 - Intermembrane phospholipid transport system binding protein MlaD, at 204,936 to 205,403 _00181
Group Condition PFR28_00177 PFR28_00178 PFR28_00179 PFR28_00180 PFR28_00181
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM N.D. N.D. -4.3 -5.6 -4.8
carbon source propionate carbon 20 mM N.D. N.D. -3.3 -4.4 -3.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct N.D. N.D. -3.3 -4.1 -3.8
carbon source octanoate (C) 10 mM N.D. N.D. -3.2 -3.5 -3.4
carbon source propionate carbon 20 mM N.D. N.D. -3.0 -4.0 -2.7
carbon source p-Coumaric (C) 2.5 mM N.D. N.D. -3.9 -2.9 -2.7
carbon source propionate carbon 20 mM N.D. N.D. -3.1 -3.1 -3.2
carbon source p-Coumaric (C) 2.5 mM N.D. N.D. -3.2 -3.0 -2.6
carbon source octanoate (C) 10 mM N.D. N.D. -3.3 -2.6 -2.6
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM N.D. N.D. -2.7 -2.5 -2.5
carbon source Ferulic Acid (C) 2.5 mM N.D. N.D. -3.0 -2.9 -1.9
carbon source p-Coumaric (C) 2.5 mM N.D. N.D. -2.8 -2.7 -2.2
carbon source Ferulic Acid (C) 2.5 mM N.D. N.D. -2.9 -2.5 -2.0
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM N.D. N.D. -2.3 -2.2 -2.9
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM N.D. N.D. -2.5 -2.5 -2.2
carbon source propionate (C) 20 mM N.D. N.D. -1.8 -2.6 -2.7
carbon source L-Phenylalanine 5 mM (C) N.D. N.D. -2.0 -2.2 -2.9
carbon source octanoate (C) 10 mM N.D. N.D. -2.6 -1.8 -2.6
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM N.D. N.D. -2.2 -2.1 -2.0
carbon source L-Phenylalanine 5 mM (C) N.D. N.D. -2.0 -2.0 -2.2
carbon source Trisodium citrate 10 mM (C) N.D. N.D. -2.1 -2.0 -2.1
carbon source Ferulic Acid (C) 2.5 mM N.D. N.D. -2.1 -1.9 -2.1
carbon source L-Carnitine 10 mM (C) N.D. N.D. -1.6 -2.5 -1.9
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM N.D. N.D. -2.1 -1.8 -1.9
carbon source L-Carnitine 10 mM (C) N.D. N.D. -2.0 -1.8 -1.8
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM N.D. N.D. -1.9 -1.8 -1.8
carbon source Vanillic Acid (C) 2.5 mM N.D. N.D. -1.7 -2.3 -1.5
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM N.D. N.D. -1.8 -1.9 -1.8
carbon source Trisodium citrate 10 mM (C) N.D. N.D. -1.9 -1.6 -2.0
carbon source L-Phenylalanine 5 mM (C) N.D. N.D. -1.7 -1.7 -2.0
remove
PFR28_00177
plot		 remove
PFR28_00178
plot		 remove
PFR28_00179		 remove
PFR28_00180
plot		 remove
PFR28_00181
plot