Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_00135 and PFR28_00136 are separated by 227 nucleotidesPFR28_00136 and PFR28_00137 overlap by 8 nucleotidesPFR28_00137 and PFR28_00138 are separated by 88 nucleotidesPFR28_00138 and PFR28_00139 are separated by 243 nucleotides PFR28_00135: PFR28_00135 - hypothetical protein, at 158,139 to 158,855 _00135 PFR28_00136: PFR28_00136 - Sensor histidine kinase RegB, at 159,083 to 160,345 _00136 PFR28_00137: PFR28_00137 - Photosynthetic apparatus regulatory protein RegA, at 160,338 to 160,898 _00137 PFR28_00138: PFR28_00138 - Vitamin B12 transport ATP-binding protein BacA, at 160,987 to 162,714 _00138 PFR28_00139: PFR28_00139 - HTH-type transcriptional regulator LutR, at 162,958 to 163,704 _00139
Group Condition PFR28_00135 PFR28_00136 PFR28_00137 PFR28_00138 PFR28_00139
carbon source Vanillic Acid (C) 2.5 mM -0.2 N.D. N.D. +0.0 -3.4
carbon source Vanillic Acid (C) 2.5 mM -0.1 N.D. N.D. +0.1 -3.6
carbon source Vanillic Acid (C) 2.5 mM +0.0 N.D. N.D. +0.0 -3.1
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.4 N.D. N.D. +0.1 -2.1
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.4 N.D. N.D. +0.2 -1.9
carbon source L-Arginine (C) 10 mM +0.1 N.D. N.D. +0.1 -2.4
carbon source L-Arginine (C) 10 mM +0.1 N.D. N.D. +0.1 -2.3
carbon source D-(+)-Galactosamine (C) 10 mM -0.2 N.D. N.D. -0.1 -1.8
carbon source L-Arginine (C) 10 mM -0.2 N.D. N.D. +0.1 -1.8
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.3 N.D. N.D. +0.2 -1.6
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.7 N.D. N.D. +0.3 -1.1
carbon source p-Coumaric (C) 2.5 mM -0.2 N.D. N.D. +0.2 -1.4
carbon source p-Coumaric (C) 2.5 mM -0.3 N.D. N.D. +0.2 -1.2
carbon source p-Coumaric (C) 2.5 mM -0.4 N.D. N.D. +0.2 -1.1
carbon source Inosine (C) -0.3 N.D. N.D. +0.4 -1.5
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.9 N.D. N.D. +0.2 -0.6
carbon source Inosine (C) -0.2 N.D. N.D. +0.3 -1.3
carbon source NAG (C) 10 mM -0.1 N.D. N.D. +0.5 -1.5
carbon source NAG (C) 10 mM -0.0 N.D. N.D. +0.5 -1.6
carbon source NAG (C) 10 mM -0.2 N.D. N.D. +0.5 -1.1
carbon source methyl ferulate (C) -0.1 N.D. N.D. +1.4 -1.6
carbon source methyl ferulate (C) -0.2 N.D. N.D. +1.2 -1.3
carbon source methyl ferulate (C) +0.2 N.D. N.D. +1.5 -1.2
carbon source methyl-trans-p-coumarate (C) -0.3 N.D. N.D. +2.3 -1.1
carbon source methyl-trans-p-coumarate (C) -0.1 N.D. N.D. +2.6 -1.5
carbon source methyl-trans-p-coumarate (C) -0.5 N.D. N.D. +2.6 -1.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.4 N.D. N.D. +0.8 +1.2
carbon source Xanthosine (C) 10 mM -0.2 N.D. N.D. +0.0 +2.1
carbon source Xanthosine (C) 10 mM -0.2 N.D. N.D. +0.1 +2.3
carbon source Xanthosine (C) 10 mM +0.1 N.D. N.D. +0.0 +2.1
remove
PFR28_00135
plot		 remove
PFR28_00136
plot		 remove
PFR28_00137		 remove
PFR28_00138
plot		 remove
PFR28_00139
plot