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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFR28_00101 and PFR28_00102 are separated by 291 nucleotides
PFR28_00102 and PFR28_00103 are separated by 37 nucleotides
PFR28_00103 and PFR28_00104 are separated by 18 nucleotides
PFR28_00104 and PFR28_00105 are separated by 292 nucleotides
PFR28_00101: PFR28_00101 - hypothetical protein, at 113,231 to 114,067
_00101
PFR28_00102: PFR28_00102 - hypothetical protein, at 114,359 to 116,389
_00102
PFR28_00103: PFR28_00103 - putative metal-dependent hydrolase YjjV, at 116,427 to 117,203
_00103
PFR28_00104: PFR28_00104 - Catabolite repressor/activator, at 117,222 to 118,217
_00104
PFR28_00105: PFR28_00105 - hypothetical protein, at 118,510 to 121,374
_00105
Group
Condition
PFR28
_00101
PFR28
_00102
PFR28
_00103
PFR28
_00104
PFR28
_00105
carbon source
D-Mannose carbon 10 mM
+0.2
+0.0
-0.1
-0.4
-4.8
carbon source
D-Mannose carbon 10 mM
-0.1
-0.0
-0.0
-0.2
-4.3
carbon source
D-Mannose carbon 10 mM
+0.0
-0.0
+0.1
-0.4
-3.6
carbon source
D-Fructose carbon 10 mM
+0.2
-0.0
+0.0
+1.2
-4.9
carbon source
D-Fructose carbon 10 mM
-0.1
-0.0
+0.3
+1.2
-4.7
carbon source
D-Fructose carbon 10 mM
+0.2
+0.1
+0.3
+1.0
-4.6
carbon source
D-Fructose (C) 10 mM
+0.0
+0.1
+0.3
+1.5
-4.6
carbon source
D-Fructose (C) 10 mM
-0.1
+0.1
+0.2
+1.5
-3.9
carbon source
Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM
-0.7
-0.1
+0.0
-0.8
-0.6
carbon source
D-Fructose (C) 10 mM
+0.0
+0.1
+0.2
+1.4
-3.6
carbon source
Vanillic Acid (C) 2.5 mM
-0.8
-0.1
-0.1
-0.8
-0.0
carbon source
methyl ferulate (C)
-0.2
-0.1
-0.1
-1.3
+0.1
carbon source
4-Acetoxy-3-methoxycinnamic (C)
-0.5
-0.2
-0.0
-0.7
-0.3
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
-0.6
-0.1
-0.1
-0.4
-0.5
carbon source
Choline chloride (C)
-0.5
-0.2
-0.2
-0.4
-0.3
carbon source
methyl ferulate (C)
-0.2
+0.1
-0.3
-1.0
-0.1
carbon source
L-Leucine (C) 10 mM
+0.1
+0.1
+0.1
-1.1
-0.5
carbon source
L-Lactate (C) 10 mM
+0.4
-0.2
-0.4
-0.7
-0.3
carbon source
D(+)-Glucuronic carbon 10 mM
+0.2
-0.0
-0.1
-1.2
+0.1
carbon source
D(+)-Glucuronic carbon 10 mM
+0.3
+0.0
-0.1
-1.1
-0.0
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-0.4
+0.4
+0.2
-0.7
-0.2
carbon source
L-Leucine (C) 10 mM
+0.2
+0.1
+0.1
-1.2
+0.2
carbon source
L-Phenylalanine 5 mM (C)
+0.1
+0.2
+0.4
-1.0
+0.0
carbon source
D-Glucosamine Hydrochloride (C) 10 mM
-0.1
-0.0
+0.0
+0.8
-0.9
carbon source
L-Phenylalanine 5 mM (C)
+0.2
+0.1
+0.4
-0.9
+0.2
carbon source
D-Glucosamine Hydrochloride (C) 10 mM
+0.0
+0.1
+0.2
+0.9
-0.6
carbon source
D-Glucosamine Hydrochloride (C) 10 mM
+0.1
+0.3
+0.1
+0.8
-0.5
carbon source
Inosine carbon 10 mM
-0.3
+0.2
+0.4
+5.2
+1.1
carbon source
Inosine carbon 10 mM
+0.1
+0.2
+0.5
+5.6
+1.2
carbon source
Inosine carbon 10 mM
-0.5
+0.0
+0.4
+6.3
+1.6
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PFR28_00103
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PFR28_00105
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