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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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500 nt
PFR28_00056 and PFR28_00058 are separated by 735 nucleotides
PFR28_00058 and PFR28_00059 are separated by 114 nucleotides
PFR28_00059 and PFR28_00060 overlap by 4 nucleotides
PFR28_00060 and PFR28_00061 overlap by 4 nucleotides
PFR28_00056: PFR28_00056 - hypothetical protein, at 65,828 to 65,935
_00056
PFR28_00058: PFR28_00058 - hypothetical protein, at 66,671 to 66,961
_00058
PFR28_00059: PFR28_00059 - hypothetical protein, at 67,076 to 69,886
_00059
PFR28_00060: PFR28_00060 - hypothetical protein, at 69,883 to 70,554
_00060
PFR28_00061: PFR28_00061 - Lactate utilization protein B, at 70,551 to 72,008
_00061
Group
Condition
PFR28
_00056
PFR28
_00058
PFR28
_00059
PFR28
_00060
PFR28
_00061
carbon source
L-Lactate (C) 10 mM
-0.2
N.D.
-0.1
-5.5
-6.7
carbon source
D,L-Lactate carbon 20 mM
-0.2
N.D.
-0.1
-5.9
-5.2
carbon source
D,L-Lactate (C) 20 mM
-0.4
N.D.
-1.0
-5.7
-4.2
carbon source
D,L-Lactate (C) 20 mM
+0.1
N.D.
-1.1
-4.7
-5.6
carbon source
L-Lactate (C)
+0.3
N.D.
+0.1
-5.4
-6.1
carbon source
D,L-Lactate (C) 20 mM
-0.4
N.D.
-1.2
-4.6
-4.5
carbon source
D,L-Lactate carbon 20 mM
-0.1
N.D.
-0.1
-4.9
-5.5
carbon source
D,L-Lactate carbon 20 mM
-0.3
N.D.
-0.1
-4.9
-5.3
carbon source
L-Lactate (C)
+0.3
N.D.
-0.0
-5.4
-5.4
carbon source
L-Lactate (C)
+0.5
N.D.
+0.0
-5.1
-4.9
carbon source
L-Lactate (C) 10 mM
-0.5
N.D.
-0.2
-3.5
-5.0
carbon source
L-Lactate (C) 10 mM
-0.1
N.D.
+0.0
-4.6
-4.5
carbon source
Shikimic Acid (C) 10 mM
-0.6
N.D.
-0.2
-0.6
-0.7
carbon source
Shikimic Acid (C) 10 mM
-0.1
N.D.
-0.4
-1.0
-0.5
carbon source
succinate (C)
-0.5
N.D.
-0.5
-0.7
-0.2
carbon source
Shikimic Acid (C) 10 mM
-0.3
N.D.
-0.5
-0.4
-0.6
carbon source
NAG (C) 10 mM
-0.3
N.D.
-0.7
-0.4
-0.4
carbon source
Inosine carbon 10 mM
-0.9
N.D.
-0.2
-0.3
-0.2
carbon source
D-Ribose carbon 10 mM
-0.5
N.D.
-0.5
-0.1
-0.6
carbon source
Shikimic Acid carbon 10 mM
-0.1
N.D.
-0.7
-0.4
-0.5
carbon source
Fumarate (C) 20 mM
-0.1
N.D.
-0.9
-0.4
-0.2
carbon source
Shikimic Acid carbon 10 mM
-0.1
N.D.
-0.5
-0.6
-0.4
carbon source
Guanosine (C)
-0.1
N.D.
-0.3
-0.6
-0.5
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-0.6
N.D.
+0.2
-0.8
-0.2
carbon source
Shikimic Acid carbon 10 mM
+0.3
N.D.
-0.6
-0.5
-0.4
carbon source
2-Keto-D-gluconic hemicalcium salt (C) 10 mM
+0.3
N.D.
-0.6
-0.2
-0.3
carbon source
Xanthosine (C)
+0.7
N.D.
-0.7
-0.3
-0.2
carbon source
Inosine (C)
+0.5
N.D.
-0.2
-0.7
+0.1
carbon source
Xanthosine (C)
+0.8
N.D.
-0.4
-0.2
-0.2
carbon source
propionate (C) 20 mM
-0.1
N.D.
-0.5
+0.3
+0.6
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