Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_00048 and PFR28_00049 overlap by 4 nucleotidesPFR28_00049 and PFR28_00050 are separated by 16 nucleotidesPFR28_00050 and PFR28_00051 are separated by 9 nucleotidesPFR28_00051 and PFR28_00052 are separated by 103 nucleotides PFR28_00048: PFR28_00048 - putative D,D-dipeptide transport ATP-binding protein DdpF, at 58,130 to 59,119 _00048 PFR28_00049: PFR28_00049 - Oligopeptide transport ATP-binding protein OppD, at 59,116 to 60,132 _00049 PFR28_00050: PFR28_00050 - Dipeptide transport system permease protein DppC, at 60,149 to 61,051 _00050 PFR28_00051: PFR28_00051 - Glutathione transport system permease protein GsiC, at 61,061 to 61,978 _00051 PFR28_00052: PFR28_00052 - Heme-binding protein A, at 62,082 to 63,602 _00052
Group Condition PFR28_00048 PFR28_00049 PFR28_00050 PFR28_00051 PFR28_00052
carbon source D-(+)-Galactosamine (C) 10 mM -0.8 -0.2 -0.1 -0.1 -0.1
carbon source D-(+)-Galactosamine (C) 10 mM -0.1 +0.0 -0.1 -1.1 -0.0
carbon source propionate (C) 20 mM -0.6 -0.2 -0.0 -0.6 +0.1
carbon source Shikimic Acid (C) 10 mM -0.3 -0.3 +0.1 -0.8 +0.1
carbon source Cytidine carbon 10 mM -0.1 -0.2 -0.5 -0.4 +0.1
carbon source Betaine (C) +0.3 -1.1 +0.1 -0.3 -0.1
carbon source L-Lactate (C) 10 mM -0.6 -0.0 -0.2 -0.3 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.8 +0.7 +0.1 -0.8 -0.1
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM +0.3 +0.2 -0.1 -0.7 -0.5
carbon source L-Lysine (C) 10 mM -0.0 +0.3 -0.2 -0.6 +0.1
carbon source L-Phenylalanine carbon 5 mM -0.3 +0.5 -0.3 -0.3 +0.1
carbon source Quinic Acid (C) -0.5 +0.5 -0.3 +0.2 -0.2
carbon source Azelaic carbon 10 mM +0.2 +0.3 +0.0 -0.9 +0.2
carbon source Glycocyamine 20 mM (C) +0.1 -0.4 +0.2 -0.4 +0.3
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 +0.1 +0.1 -0.6 +0.5
carbon source L-Lactate (C) 10 mM -0.4 +0.5 +0.1 -0.4 +0.1
carbon source Glycocyamine 10 mM (C) +0.4 +0.1 -0.1 -0.6 +0.3
carbon source Inosine carbon 10 mM +0.3 +0.3 -0.2 -0.3 -0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.6 -0.3 -0.3 -0.2 +0.3
carbon source 4-Acetoxy-3-methoxycinnamic (C) +0.5 -0.4 +0.1 -0.1 +0.3
carbon source L-Carnitine (C) 10 mM -0.3 +0.3 -0.0 +0.5 -0.2
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.2 +0.5 -0.2 +0.4 +0.0
carbon source L-tyrosine (C) 10 mM -0.2 +0.8 +0.2 -0.2 +0.0
carbon source sn-glycero-3-phosphocholine (C) -0.1 +0.4 -0.0 +0.6 -0.1
carbon source Guanosine (C) +0.0 +1.0 -0.2 +0.4 -0.4
carbon source 4-Guanidinobutyric (C) +0.3 +0.3 -0.4 +0.5 +0.1
carbon source p-Coumaric (C) -0.1 +0.7 -0.2 +0.3 +0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.0 +0.3 -0.2 +0.5 +0.4
carbon source Cytidine (C) +0.5 +0.5 -0.0 +0.2 -0.0
carbon source butyrate (C) 10 mM +0.2 +0.2 -0.0 +0.8 +0.5
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