Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_00039 and PFR28_00040 are separated by 21 nucleotidesPFR28_00040 and PFR28_00041 are separated by 168 nucleotidesPFR28_00041 and PFR28_00042 are separated by 200 nucleotidesPFR28_00042 and PFR28_00043 are separated by 135 nucleotides PFR28_00039: PFR28_00039 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 47,995 to 48,828 _00039 PFR28_00040: PFR28_00040 - HTH-type transcriptional activator RhaS, at 48,850 to 49,788 _00040 PFR28_00041: PFR28_00041 - Leucine-responsive regulatory protein, at 49,957 to 50,466 _00041 PFR28_00042: PFR28_00042 - 1-aminocyclopropane-1-carboxylate deaminase, at 50,667 to 51,683 _00042 PFR28_00043: PFR28_00043 - hypothetical protein, at 51,819 to 52,277 _00043
Group Condition PFR28_00039 PFR28_00040 PFR28_00041 PFR28_00042 PFR28_00043
carbon source Shikimic Acid (C) 10 mM -0.3 +0.0 -0.8 -0.3 -0.2
carbon source butyrate (C) -0.1 +0.0 -0.8 -0.3 -0.3
carbon source Cytidine (C) -0.2 -0.2 -1.6 +1.0 -0.4
carbon source Choline (C) 10 mM -0.2 +0.0 -1.1 -0.1 +0.1
carbon source trans-aconitic (C) -0.3 +0.1 -0.8 -0.3 +0.1
carbon source D-Mannitol (C) 10 mM -0.2 -0.1 -0.5 -0.4 +0.1
carbon source Vanillic Acid (C) 2.5 mM -0.5 -0.2 -0.3 -0.4 +0.2
carbon source Inosine carbon 10 mM -0.4 -0.3 -0.8 -0.1 +0.6
carbon source Vanillic Acid (C) 2.5 mM +0.2 +0.1 -0.3 +0.1 -0.8
carbon source D-Glucosamine Hydrochloride (C) 10 mM -0.1 +0.0 -1.0 +0.2 +0.2
carbon source D-Glucuronic (C) 10 mM +0.1 +0.0 -1.4 +0.3 +0.2
carbon source acetate carbon 10 mM -0.0 +0.0 -0.6 +0.3 -0.3
carbon source L-Lactate (C) 10 mM -0.4 -0.3 +0.3 -0.5 +0.4
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.1 +0.2 -1.0 -0.0 +0.2
carbon source butyrate (C) 10 mM -0.0 +0.2 -0.5 +0.5 -0.5
carbon source Cytidine (C) -0.3 -0.0 -1.0 +0.8 +0.4
carbon source methyl-trans-p-coumarate (C) -0.3 +0.2 -0.7 +0.1 +0.5
carbon source Cytidine carbon 10 mM -0.1 +0.1 -0.8 +1.1 -0.1
carbon source butyrate (C) 10 mM +0.1 -0.1 +1.0 -0.6 -0.2
carbon source Cytidine carbon 10 mM -0.2 -0.0 -0.0 +0.9 -0.3
carbon source Guanosine (C) +0.5 +0.1 -0.5 +0.4 -0.1
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM +0.3 +0.2 +0.4 -0.4 -0.1
carbon source D-Xylose (C) 10 mM -0.0 -0.2 -0.4 +0.7 +0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.2 +0.3 +0.8 -0.1 -0.7
carbon source D-Ribose (C) 10 mM +0.1 -0.0 -0.5 +0.4 +0.5
carbon source octanoate (C) -0.3 +0.1 +0.4 +0.3 +0.3
carbon source L-Lysine (C) 10 mM -0.1 +0.0 +0.7 -0.2 +0.7
carbon source Cytidine (C) +0.1 +0.0 -0.3 +1.1 +0.2
carbon source Glycocyamine 10 mM (C) +0.5 +0.1 +0.5 -0.1 +0.2
carbon source Uridine (C) 10 mM +0.3 +0.2 -0.2 +0.7 +0.4
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