Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 38 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
PFLU_RS21520 and PFLU_RS21525 are separated by 301 nucleotides
PFLU_RS21525 and PFLU_RS31750 are separated by 15 nucleotides
PFLU_RS31750 and PFLU_RS21530 overlap by 77 nucleotides
PFLU_RS21530 and PFLU_RS21535 are separated by 94 nucleotides
PFLU_RS21520: PFLU_RS21520 - thioesterase, at 4,853,870 to 4,854,622
_RS21520
PFLU_RS21525: PFLU_RS21525 - RNA polymerase factor sigma-70, at 4,854,924 to 4,855,475
_RS21525
PFLU_RS31750: PFLU_RS31750 - hypothetical protein, at 4,855,491 to 4,855,703
_RS31750
PFLU_RS21530: PFLU_RS21530 - transporter substrate-binding domain-containing protein, at 4,855,627 to 4,856,415
_RS21530
PFLU_RS21535: PFLU_RS21535 - TetR/AcrR family transcriptional regulator, at 4,856,510 to 4,857,133
_RS21535
Group
Condition
PFLU
_RS21520
PFLU
_RS21525
PFLU
_RS31750
PFLU
_RS21530
PFLU
_RS21535
carbon source
acetate (C)
-1.0
-0.1
+0.3
-1.2
-0.1
carbon source
acetate (C)
-0.4
-0.1
-0.6
-0.7
-0.2
carbon source
acetate (C)
-0.6
-0.2
-0.0
-0.6
-0.2
carbon source
Trisodium citrate (C)
-1.1
+0.0
-0.2
-0.2
-0.1
carbon source
D-Glucose (C); with MOPS
-1.2
-0.3
+0.1
+0.1
+0.0
carbon source
NAG (C); with MOPS
-0.3
-0.4
-0.2
+0.9
-0.9
carbon source
D-Xylose (C)
-0.6
-0.1
-0.4
+0.5
-0.3
carbon source
NAG (C); with MOPS
-0.7
-0.3
-0.0
+0.9
-0.7
carbon source
Trisodium citrate (C); with MOPS
-0.3
+0.1
-0.1
-0.2
-0.1
carbon source
Trisodium citrate (C)
-0.4
-0.1
-0.3
-0.1
+0.3
carbon source
NAG (C)
-0.6
-0.1
-0.1
+0.9
-0.6
carbon source
L-Arabinose (C)
-0.6
+0.3
-0.4
+0.2
+0.0
carbon source
D-Xylose (C)
-0.4
+0.1
-0.1
+0.3
-0.3
carbon source
succinate (C)
-0.3
+0.0
-0.1
+0.1
+0.2
carbon source
NAG (C); with MOPS
+0.1
+0.1
-0.3
+1.2
-1.0
carbon source
NAG (C)
-0.1
-0.1
+0.0
+0.8
-0.6
carbon source
D-Glucose (C)
+0.3
+0.0
+0.0
+0.2
-0.3
carbon source
succinate (C); with MOPS
+0.3
-0.1
+0.1
+0.1
-0.2
carbon source
D,L-Lactate (C)
+0.2
+0.2
+0.1
+0.2
-0.3
carbon source
acetate (C)
+0.1
+0.1
+0.1
+0.3
-0.3
carbon source
L-Arabinose (C)
-0.4
+0.5
+0.0
+0.3
-0.0
carbon source
D-Glucose (C)
+0.4
-0.0
+0.1
+0.2
-0.2
carbon source
L-Arabinose (C); with MOPS
+0.0
+0.1
+0.2
+0.5
-0.3
carbon source
D-Glucose (C); with MOPS
+0.3
+0.1
+0.2
+0.2
-0.2
carbon source
D-Glucose (C)
+0.4
-0.0
+0.1
+0.3
-0.2
carbon source
succinate (C)
+0.0
+0.4
-0.1
+0.2
+0.0
carbon source
succinate (C)
+0.6
+0.3
-0.2
+0.1
-0.1
carbon source
L-Arabinose (C)
-0.2
+0.2
+0.3
+0.4
+0.0
carbon source
L-Arabinose (C); with MOPS
-0.1
-0.0
+0.1
+0.9
-0.1
carbon source
L-Arabinose (C); with MOPS
-0.2
+0.2
+0.4
+1.0
-0.5
remove
PFLU_RS21520
plot
remove
PFLU_RS21525
plot
remove
PFLU_RS31750
remove
PFLU_RS21530
plot
remove
PFLU_RS21535
plot