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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS14785 and PFLU_RS14790 are separated by 141 nucleotides
PFLU_RS14790 and PFLU_RS31630 are separated by 174 nucleotides
PFLU_RS31630 and PFLU_RS14795 are separated by 169 nucleotides
PFLU_RS14795 and PFLU_RS14800 are separated by 3 nucleotides
PFLU_RS14785: PFLU_RS14785 - enoyl-CoA hydratase/isomerase family protein, at 3,307,124 to 3,308,227
_RS14785
PFLU_RS14790: PFLU_RS14790 - HPP family protein, at 3,308,369 to 3,309,079
_RS14790
PFLU_RS31630: PFLU_RS31630 - hypothetical protein, at 3,309,254 to 3,309,490
_RS31630
PFLU_RS14795: PFLU_RS14795 - phospholipid carrier-dependent glycosyltransferase, at 3,309,660 to 3,311,282
_RS14795
PFLU_RS14800: PFLU_RS14800 - UDP-glucose/GDP-mannose dehydrogenase family protein, at 3,311,286 to 3,312,677
_RS14800
Group
Condition
PFLU
_RS14785
PFLU
_RS14790
PFLU
_RS31630
PFLU
_RS14795
PFLU
_RS14800
carbon source
acetate (C)
-0.4
-0.4
-0.2
+0.1
-1.6
carbon source
acetate (C)
+0.5
-0.4
-0.8
+0.2
-1.8
carbon source
L-Arabinose (C)
+0.1
+0.1
-1.0
-0.2
-1.2
carbon source
L-Arabinose (C); with MOPS
+0.2
-0.4
-0.9
-0.1
-1.0
carbon source
L-Arabinose (C)
+0.2
-0.3
-0.7
+0.4
-1.2
carbon source
NAG (C); with MOPS
-0.0
+0.1
-0.4
+0.2
-1.3
carbon source
Trisodium citrate (C); with MOPS
+0.1
+0.1
-1.1
+0.1
-0.6
carbon source
succinate (C)
+0.1
+0.0
-1.1
+0.1
-0.3
carbon source
D-Glucose (C); with MOPS
-0.0
-0.4
+0.1
+0.0
-1.0
carbon source
Trisodium citrate (C)
-0.0
-0.2
-0.2
+0.2
-1.0
carbon source
succinate (C); with MOPS
+0.1
-0.1
-0.5
+0.1
-0.8
carbon source
D-Glucose (C)
+0.0
-0.3
-0.0
+0.2
-1.0
carbon source
Trisodium citrate (C); with MOPS
-0.1
-0.1
-0.0
-0.0
-0.8
carbon source
acetate (C)
+0.3
-0.0
+0.3
+0.3
-1.9
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.1
-0.5
+0.1
-0.6
carbon source
D-Glucose (C)
-0.0
-0.0
-0.3
+0.1
-0.8
carbon source
NAG (C); with MOPS
+0.2
+0.0
-0.5
+0.2
-0.9
carbon source
L-Arabinose (C)
+0.5
+0.3
-0.6
+0.1
-1.3
carbon source
Trisodium citrate (C)
-0.0
+0.1
-0.2
+0.1
-0.8
carbon source
D-Glucose (C)
+0.2
+0.3
-0.5
+0.1
-0.8
carbon source
D-Xylose (C)
-0.1
-0.5
-0.2
+0.1
+0.0
carbon source
D-Glucose (C); with MOPS
+0.0
-0.0
+0.0
+0.1
-0.7
carbon source
L-Arabinose (C); with MOPS
+0.1
+0.2
+0.1
+0.1
-0.9
carbon source
NAG (C); with MOPS
-0.1
+0.3
+0.5
-0.0
-1.1
carbon source
succinate (C)
+0.2
+0.0
-0.2
+0.1
-0.5
carbon source
Trisodium citrate (C)
+0.1
+0.3
-0.0
+0.1
-0.8
carbon source
succinate (C); with MOPS
-0.0
+0.1
-0.2
+0.2
-0.4
carbon source
D-Glucose (C); with MOPS
-0.1
+0.2
+0.4
+0.2
-1.0
carbon source
L-Arabinose (C); with MOPS
+0.3
-0.2
+0.4
+0.2
-1.0
carbon source
succinate (C); with MOPS
+0.2
+0.2
-0.0
+0.1
-0.5
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