Private Fitness
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS13775 and PFLU_RS13780 overlap by 1 nucleotides
PFLU_RS13780 and PFLU_RS30290 are separated by 59 nucleotides
PFLU_RS30290 and PFLU_RS30780 are separated by 14 nucleotides
PFLU_RS30780 and PFLU_RS13790 overlap by 4 nucleotides
PFLU_RS13775: PFLU_RS13775 - hypothetical protein, at 3,111,316 to 3,111,921
_RS13775
PFLU_RS13780: PFLU_RS13780 - hypothetical protein, at 3,111,921 to 3,112,352
_RS13780
PFLU_RS30290: PFLU_RS30290 - hypothetical protein, at 3,112,412 to 3,113,188
_RS30290
PFLU_RS30780: PFLU_RS30780 - DUF4406 domain-containing protein, at 3,113,203 to 3,113,373
_RS30780
PFLU_RS13790: PFLU_RS13790 - hypothetical protein, at 3,113,370 to 3,114,011
_RS13790
Group
Condition
PFLU
_RS13775
PFLU
_RS13780
PFLU
_RS30290
PFLU
_RS30780
PFLU
_RS13790
carbon source
L-Arabinose (C); with MOPS
-0.7
-0.2
-0.3
N.D.
+0.1
carbon source
L-Arabinose (C)
-1.1
+0.1
+0.1
N.D.
+0.0
carbon source
Trisodium citrate (C); with MOPS
-0.2
-0.1
-0.2
N.D.
+0.2
carbon source
D-Glucose (C)
-0.2
-0.3
-0.1
N.D.
+0.2
carbon source
NAG (C)
+0.1
+0.0
-0.3
N.D.
-0.1
carbon source
acetate (C)
-0.4
+0.2
-0.0
N.D.
-0.1
carbon source
D-Xylose (C)
+0.1
+0.1
-0.4
N.D.
+0.0
carbon source
L-Arabinose (C)
-0.5
-0.1
-0.1
N.D.
+0.4
carbon source
NAG (C)
+0.2
-0.1
-0.1
N.D.
-0.0
carbon source
Trisodium citrate (C); with MOPS
-0.1
-0.3
+0.2
N.D.
+0.1
carbon source
succinate (C)
-0.3
-0.2
+0.1
N.D.
+0.3
carbon source
acetate (C)
-0.5
+0.2
+0.2
N.D.
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.3
-0.4
-0.1
N.D.
+0.1
carbon source
NAG (C); with MOPS
-0.1
-0.2
+0.1
N.D.
+0.3
carbon source
succinate (C); with MOPS
+0.2
-0.2
-0.1
N.D.
+0.2
carbon source
D-Glucose (C)
+0.5
-0.2
-0.5
N.D.
+0.2
carbon source
acetate (C)
+0.5
-0.3
-0.4
N.D.
+0.3
carbon source
succinate (C); with MOPS
+0.2
-0.2
+0.2
N.D.
-0.0
carbon source
succinate (C)
+0.1
-0.2
+0.2
N.D.
+0.3
carbon source
NAG (C); with MOPS
+0.3
-0.1
-0.2
N.D.
+0.3
carbon source
succinate (C)
-0.1
+0.1
+0.4
N.D.
+0.1
carbon source
Trisodium citrate (C)
+0.2
-0.4
+0.2
N.D.
+0.5
carbon source
L-Arabinose (C)
-0.2
-0.2
+0.5
N.D.
+0.3
carbon source
acetate (C)
+0.2
-0.5
+0.6
N.D.
+0.2
carbon source
D-Glucose (C); with MOPS
-0.1
+0.1
+0.3
N.D.
+0.3
carbon source
D-Xylose (C)
+0.4
+0.1
-0.0
N.D.
+0.2
carbon source
L-Arabinose (C); with MOPS
+0.4
+0.1
+0.2
N.D.
-0.0
carbon source
D-Glucose (C); with MOPS
-0.1
+0.0
+0.3
N.D.
+0.4
carbon source
NAG (C); with MOPS
+0.2
-0.2
+0.3
N.D.
+0.4
carbon source
acetate (C)
+1.3
+0.1
-0.0
N.D.
-0.1
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