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Protein
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Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS30155 and PFLU_RS30160 are separated by 148 nucleotides
PFLU_RS30160 and PFLU_RS30165 are separated by 9 nucleotides
PFLU_RS30165 and PFLU_RS30170 are separated by 18 nucleotides
PFLU_RS30170 and PFLU_RS30175 overlap by 4 nucleotides
PFLU_RS30155: PFLU_RS30155 - F0F1 ATP synthase subunit I, at 6,708,609 to 6,709,016
_RS30155
PFLU_RS30160: PFLU_RS30160 - ParB/RepB/Spo0J family partition protein, at 6,709,165 to 6,710,037
_RS30160
PFLU_RS30165: PFLU_RS30165 - ParA family protein, at 6,710,047 to 6,710,844
_RS30165
PFLU_RS30170: PFLU_RS30170 - 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG, at 6,710,863 to 6,711,507
_RS30170
PFLU_RS30175: PFLU_RS30175 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG, at 6,711,504 to 6,713,396
_RS30175
Group
Condition
PFLU
_RS30155
PFLU
_RS30160
PFLU
_RS30165
PFLU
_RS30170
PFLU
_RS30175
carbon source
NAG (C); with MOPS
N.D.
-3.1
-3.6
-1.0
N.D.
carbon source
NAG (C); with MOPS
N.D.
-2.3
-3.7
-0.5
N.D.
carbon source
NAG (C); with MOPS
N.D.
-3.1
-3.2
-0.2
N.D.
carbon source
L-Arabinose (C); with MOPS
N.D.
-3.1
-1.7
-0.2
N.D.
carbon source
succinate (C); with MOPS
N.D.
-2.4
-2.2
-0.3
N.D.
carbon source
D-Glucose (C); with MOPS
N.D.
-1.4
-2.7
-0.8
N.D.
carbon source
succinate (C); with MOPS
N.D.
-2.7
-2.0
-0.2
N.D.
carbon source
succinate (C)
N.D.
-2.3
-1.7
-0.4
N.D.
carbon source
succinate (C); with MOPS
N.D.
-2.5
-1.6
-0.1
N.D.
carbon source
succinate (C)
N.D.
-1.7
-2.2
-0.2
N.D.
carbon source
D-Glucose (C); with MOPS
N.D.
-1.4
-1.6
-0.9
N.D.
carbon source
NAG (C)
N.D.
-1.2
-2.0
-0.4
N.D.
carbon source
Trisodium citrate (C); with MOPS
N.D.
-1.3
-1.9
-0.3
N.D.
carbon source
acetate (C)
N.D.
-1.4
-1.3
-0.8
N.D.
carbon source
D-Glucose (C)
N.D.
-1.9
-2.0
+0.6
N.D.
carbon source
NAG (C)
N.D.
-1.3
-1.8
-0.2
N.D.
carbon source
succinate (C)
N.D.
-1.4
-1.9
-0.1
N.D.
carbon source
D-Glucose (C)
N.D.
-1.7
-1.9
+0.2
N.D.
carbon source
L-Arabinose (C); with MOPS
N.D.
-1.3
-1.8
-0.1
N.D.
carbon source
Trisodium citrate (C); with MOPS
N.D.
-1.3
-1.6
-0.2
N.D.
carbon source
Trisodium citrate (C)
N.D.
-1.4
-1.5
+0.2
N.D.
carbon source
D-Glucose (C); with MOPS
N.D.
-0.3
-2.1
-0.3
N.D.
carbon source
D-Glucose (C)
N.D.
-0.8
-2.0
+0.3
N.D.
carbon source
L-Arabinose (C)
N.D.
-0.5
-2.0
+0.1
N.D.
carbon source
Trisodium citrate (C)
N.D.
-0.2
-2.0
-0.1
N.D.
carbon source
L-Arabinose (C)
N.D.
-1.0
-1.8
+0.5
N.D.
carbon source
Trisodium citrate (C); with MOPS
N.D.
-0.3
-1.6
-0.3
N.D.
carbon source
acetate (C)
N.D.
-0.9
-1.9
+0.8
N.D.
carbon source
Trisodium citrate (C)
N.D.
-0.4
-1.6
+0.3
N.D.
carbon source
L-Arabinose (C)
N.D.
+0.8
-1.8
+0.3
N.D.
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