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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS29895 and PFLU_RS29900 are separated by 247 nucleotides
PFLU_RS29900 and PFLU_RS29905 are separated by 237 nucleotides
PFLU_RS29905 and PFLU_RS29910 are separated by 135 nucleotides
PFLU_RS29910 and PFLU_RS29915 are separated by 193 nucleotides
PFLU_RS29895: PFLU_RS29895 - EAL domain-containing protein, at 6,648,542 to 6,651,418
_RS29895
PFLU_RS29900: PFLU_RS29900 - DNA helicase II, at 6,651,666 to 6,653,849
_RS29900
PFLU_RS29905: PFLU_RS29905 - Tim44 domain-containing protein, at 6,654,087 to 6,654,956
_RS29905
PFLU_RS29910: PFLU_RS29910 - SMI1/KNR4 family protein, at 6,655,092 to 6,655,499
_RS29910
PFLU_RS29915: PFLU_RS29915 - cation:proton antiporter, at 6,655,693 to 6,657,456
_RS29915
Group
Condition
PFLU
_RS29895
PFLU
_RS29900
PFLU
_RS29905
PFLU
_RS29910
PFLU
_RS29915
carbon source
L-Arabinose (C)
-0.3
-1.5
-0.7
-1.3
+0.0
carbon source
L-Arabinose (C)
-0.3
-1.3
-0.3
-1.6
+0.2
carbon source
L-Arabinose (C)
-0.1
-0.9
-1.0
-1.4
+0.2
carbon source
NAG (C); with MOPS
-0.4
-1.3
-0.9
-0.2
+0.0
carbon source
acetate (C)
+0.0
-1.3
-0.9
-0.2
-0.0
carbon source
L-Arabinose (C); with MOPS
+0.0
-1.2
-0.7
-0.5
+0.1
carbon source
NAG (C); with MOPS
-0.4
-1.0
-0.6
-0.2
-0.0
carbon source
NAG (C); with MOPS
-0.2
-1.4
-0.6
-0.2
+0.2
carbon source
acetate (C)
-0.1
-0.8
-0.6
-1.0
+0.3
carbon source
Trisodium citrate (C); with MOPS
+0.0
-1.3
-0.3
-0.2
-0.3
carbon source
Trisodium citrate (C)
+0.0
-1.0
-1.1
-0.0
+0.2
carbon source
succinate (C); with MOPS
+0.1
-1.5
-0.5
+0.2
-0.1
carbon source
NAG (C)
-0.2
-0.3
-1.1
-0.2
+0.1
carbon source
L-Arabinose (C); with MOPS
-0.1
-1.1
+0.2
-0.4
-0.3
carbon source
NAG (C)
-0.2
-0.3
-1.0
-0.3
+0.1
carbon source
succinate (C); with MOPS
-0.2
-1.0
-0.2
-0.2
+0.1
carbon source
succinate (C); with MOPS
+0.1
-1.4
+0.2
-0.2
-0.0
carbon source
Trisodium citrate (C); with MOPS
+0.0
-1.3
-0.4
+0.2
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.1
-1.0
-0.3
+0.0
-0.1
carbon source
L-Arabinose (C); with MOPS
-0.2
-1.1
+0.6
-0.5
-0.1
carbon source
D-Glucose (C)
+0.0
-1.2
-0.2
-0.1
+0.1
carbon source
succinate (C)
-0.1
-1.1
-0.2
+0.0
+0.0
carbon source
D-Glucose (C); with MOPS
-0.1
-0.9
-0.3
-0.0
+0.1
carbon source
succinate (C)
+0.0
-1.1
-0.2
-0.1
+0.2
carbon source
acetate (C)
-0.1
-0.5
-0.1
-0.9
+0.5
carbon source
D-Glucose (C); with MOPS
-0.3
-1.0
+0.2
+0.1
+0.0
carbon source
Trisodium citrate (C)
-0.0
-1.0
+0.4
-0.2
-0.1
carbon source
D-Glucose (C)
-0.1
-1.3
+0.3
+0.1
+0.1
carbon source
succinate (C)
-0.0
-1.1
-0.1
+0.2
+0.1
carbon source
acetate (C)
-0.1
-0.4
-0.3
+0.1
+0.6
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