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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS29690 and PFLU_RS29695 are separated by 206 nucleotides
PFLU_RS29695 and PFLU_RS29700 are separated by 191 nucleotides
PFLU_RS29700 and PFLU_RS29705 are separated by 36 nucleotides
PFLU_RS29705 and PFLU_RS29710 are separated by 195 nucleotides
PFLU_RS29690: PFLU_RS29690 - SEL1-like repeat protein, at 6,600,462 to 6,601,331
_RS29690
PFLU_RS29695: PFLU_RS29695 - HU family DNA-binding protein, at 6,601,538 to 6,601,813
_RS29695
PFLU_RS29700: PFLU_RS29700 - pyridine nucleotide-disulfide oxidoreductase, at 6,602,005 to 6,603,153
_RS29700
PFLU_RS29705: PFLU_RS29705 - rubredoxin, at 6,603,190 to 6,603,357
_RS29705
PFLU_RS29710: PFLU_RS29710 - chorismate lyase, at 6,603,553 to 6,604,116
_RS29710
Group
Condition
PFLU
_RS29690
PFLU
_RS29695
PFLU
_RS29700
PFLU
_RS29705
PFLU
_RS29710
carbon source
D-Glucose (C)
N.D.
N.D.
-0.4
+0.5
-0.8
carbon source
D,L-Lactate (C)
N.D.
N.D.
-0.2
-0.3
-0.2
carbon source
acetate (C)
N.D.
N.D.
-0.4
+0.3
-0.6
carbon source
L-Arabinose (C)
N.D.
N.D.
+0.3
+1.0
-1.8
carbon source
succinate (C)
N.D.
N.D.
-0.2
+0.4
-0.4
carbon source
NAG (C); with MOPS
N.D.
N.D.
-0.4
+0.6
-0.3
carbon source
succinate (C); with MOPS
N.D.
N.D.
-0.0
+0.2
-0.4
carbon source
L-Arabinose (C); with MOPS
N.D.
N.D.
-0.4
+0.4
-0.1
carbon source
acetate (C)
N.D.
N.D.
-0.2
+0.5
-0.2
carbon source
succinate (C)
N.D.
N.D.
-0.2
+0.5
-0.2
carbon source
acetate (C)
N.D.
N.D.
-0.6
+0.8
-0.0
carbon source
Trisodium citrate (C)
N.D.
N.D.
-0.1
+0.5
-0.2
carbon source
Trisodium citrate (C); with MOPS
N.D.
N.D.
-0.3
+0.5
+0.1
carbon source
Trisodium citrate (C); with MOPS
N.D.
N.D.
-0.1
+0.5
-0.1
carbon source
Trisodium citrate (C)
N.D.
N.D.
-0.3
+0.8
-0.2
carbon source
D-Glucose (C); with MOPS
N.D.
N.D.
-0.1
+0.5
-0.1
carbon source
L-Arabinose (C); with MOPS
N.D.
N.D.
+0.2
+0.4
-0.2
carbon source
D-Glucose (C); with MOPS
N.D.
N.D.
-0.2
+0.6
+0.0
carbon source
D-Glucose (C)
N.D.
N.D.
+0.0
+0.8
-0.3
carbon source
D-Glucose (C)
N.D.
N.D.
-0.3
+0.9
-0.2
carbon source
NAG (C); with MOPS
N.D.
N.D.
+0.1
+0.7
-0.2
carbon source
NAG (C)
N.D.
N.D.
+0.3
+0.3
-0.1
carbon source
D-Glucose (C); with MOPS
N.D.
N.D.
+0.2
+0.5
-0.1
carbon source
Trisodium citrate (C); with MOPS
N.D.
N.D.
-0.2
+0.7
+0.1
carbon source
Trisodium citrate (C)
N.D.
N.D.
+0.1
+0.5
+0.1
carbon source
succinate (C)
N.D.
N.D.
-0.1
+0.8
-0.0
carbon source
L-Arabinose (C); with MOPS
N.D.
N.D.
+0.0
+0.7
-0.0
carbon source
L-Arabinose (C)
N.D.
N.D.
+0.4
+0.4
+0.0
carbon source
L-Arabinose (C)
N.D.
N.D.
+1.0
+0.4
-0.5
carbon source
NAG (C); with MOPS
N.D.
N.D.
+0.0
+0.7
+0.2
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