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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS29575 and PFLU_RS29580 overlap by 1 nucleotides
PFLU_RS29580 and PFLU_RS29585 overlap by 1 nucleotides
PFLU_RS29585 and PFLU_RS29590 overlap by 4 nucleotides
PFLU_RS29590 and PFLU_RS29595 are separated by 0 nucleotides
PFLU_RS29575: PFLU_RS29575 - ABC transporter permease, at 6,564,266 to 6,565,450
_RS29575
PFLU_RS29580: PFLU_RS29580 - ABC transporter ATP-binding protein, at 6,565,450 to 6,566,154
_RS29580
PFLU_RS29585: PFLU_RS29585 - protein kinase, at 6,566,154 to 6,569,129
_RS29585
PFLU_RS29590: PFLU_RS29590 - serine/threonine-protein phosphatase, at 6,569,126 to 6,569,845
_RS29590
PFLU_RS29595: PFLU_RS29595 - type VI secretion system-associated protein TagF, at 6,569,846 to 6,570,499
_RS29595
Group
Condition
PFLU
_RS29575
PFLU
_RS29580
PFLU
_RS29585
PFLU
_RS29590
PFLU
_RS29595
carbon source
acetate (C)
-0.8
-0.8
-0.0
-0.6
-0.6
carbon source
L-Arabinose (C); with MOPS
-0.7
-0.9
+0.2
-0.8
-0.3
carbon source
acetate (C)
-0.1
-0.5
-0.0
-0.6
-0.4
carbon source
L-Arabinose (C); with MOPS
-0.2
-0.3
+0.1
-0.7
-0.4
carbon source
succinate (C)
-0.1
-0.4
-0.1
-0.4
-0.2
carbon source
D-Glucose (C); with MOPS
-0.3
-0.4
+0.1
-0.4
-0.1
carbon source
D-Glucose (C)
-0.1
+0.1
+0.1
-0.6
-0.2
carbon source
L-Arabinose (C)
+0.1
+0.1
-0.0
-0.6
-0.2
carbon source
D-Glucose (C)
-0.2
+0.0
+0.1
-0.4
-0.2
carbon source
D-Xylose (C)
+0.0
-0.2
-0.1
-0.2
-0.1
carbon source
acetate (C)
-0.1
+0.2
+0.1
-0.4
-0.3
carbon source
NAG (C); with MOPS
-0.3
+0.7
+0.2
-1.0
-0.1
carbon source
L-Arabinose (C)
-0.2
-0.2
-0.1
-0.2
+0.0
carbon source
L-Arabinose (C); with MOPS
-0.1
+0.3
+0.3
-0.5
-0.6
carbon source
Trisodium citrate (C); with MOPS
-0.1
-0.1
+0.1
-0.4
-0.1
carbon source
NAG (C); with MOPS
+0.0
+0.3
+0.3
-0.6
-0.4
carbon source
Trisodium citrate (C)
-0.0
+0.1
+0.0
-0.4
-0.2
carbon source
Trisodium citrate (C)
-0.1
-0.3
-0.0
+0.1
-0.1
carbon source
NAG (C); with MOPS
-0.5
+0.8
+0.2
-0.8
-0.2
carbon source
L-Arabinose (C)
-0.4
+0.3
+0.2
-0.2
-0.2
carbon source
Trisodium citrate (C); with MOPS
-0.2
+0.2
+0.1
-0.3
-0.2
carbon source
Trisodium citrate (C)
-0.1
+0.1
+0.1
-0.3
-0.1
carbon source
D-Glucose (C)
+0.1
+0.0
+0.1
-0.5
-0.1
carbon source
D-Xylose (C)
-0.1
+0.1
-0.2
-0.2
+0.1
carbon source
acetate (C)
-0.1
-0.1
-0.2
+0.3
-0.1
carbon source
D,L-Lactate (C)
-0.3
+0.3
+0.1
-0.1
-0.1
carbon source
succinate (C); with MOPS
-0.1
+0.3
+0.2
-0.2
-0.2
carbon source
NAG (C)
+0.1
+0.0
+0.1
-0.3
+0.1
carbon source
succinate (C)
-0.3
+0.3
+0.2
-0.1
-0.1
carbon source
succinate (C); with MOPS
-0.2
+0.4
+0.3
-0.2
-0.0
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