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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS28970 and PFLU_RS28975 are separated by 69 nucleotides
PFLU_RS28975 and PFLU_RS28980 overlap by 4 nucleotides
PFLU_RS28980 and PFLU_RS28985 overlap by 1 nucleotides
PFLU_RS28985 and PFLU_RS28990 are separated by 97 nucleotides
PFLU_RS28970: PFLU_RS28970 - EVE domain-containing protein, at 6,439,775 to 6,440,224
_RS28970
PFLU_RS28975: PFLU_RS28975 - HlyD family efflux transporter periplasmic adaptor subunit, at 6,440,294 to 6,441,259
_RS28975
PFLU_RS28980: PFLU_RS28980 - ribosome-associated ATPase/putative transporter RbbA, at 6,441,256 to 6,443,973
_RS28980
PFLU_RS28985: PFLU_RS28985 - ABC transporter permease, at 6,443,973 to 6,445,091
_RS28985
PFLU_RS28990: PFLU_RS28990 - flagellar basal body-associated protein FliL, at 6,445,189 to 6,445,596
_RS28990
Group
Condition
PFLU
_RS28970
PFLU
_RS28975
PFLU
_RS28980
PFLU
_RS28985
PFLU
_RS28990
carbon source
acetate (C)
-0.6
-0.1
+0.2
-0.1
-0.1
carbon source
L-Arabinose (C)
+0.2
-0.1
-0.1
-0.3
+0.1
carbon source
NAG (C); with MOPS
+0.0
+0.1
+0.1
-0.3
+0.2
carbon source
D-Glucose (C); with MOPS
-0.2
+0.1
+0.1
-0.3
+0.3
carbon source
acetate (C)
-0.3
+0.1
+0.1
+0.2
+0.0
carbon source
NAG (C); with MOPS
+0.0
+0.1
+0.0
-0.4
+0.4
carbon source
L-Arabinose (C); with MOPS
+0.3
+0.1
+0.0
-0.5
+0.2
carbon source
Trisodium citrate (C); with MOPS
+0.2
-0.1
+0.1
-0.2
+0.2
carbon source
Trisodium citrate (C); with MOPS
-0.1
-0.1
+0.0
+0.0
+0.3
carbon source
L-Arabinose (C)
+0.1
+0.1
+0.2
-0.2
-0.0
carbon source
succinate (C); with MOPS
+0.0
-0.0
-0.1
+0.2
+0.2
carbon source
D-Glucose (C); with MOPS
+0.4
+0.1
+0.0
-0.3
+0.1
carbon source
D-Xylose (C)
-0.1
+0.1
+0.0
+0.1
+0.2
carbon source
D,L-Lactate (C)
-0.1
+0.2
-0.1
+0.2
+0.1
carbon source
Trisodium citrate (C)
+0.0
+0.2
+0.0
-0.1
+0.2
carbon source
succinate (C); with MOPS
+0.3
+0.1
+0.0
-0.0
+0.0
carbon source
D-Glucose (C)
-0.1
+0.1
+0.1
-0.0
+0.3
carbon source
NAG (C)
+0.1
-0.1
+0.0
+0.1
+0.3
carbon source
D-Glucose (C)
-0.1
+0.1
+0.2
+0.2
+0.2
carbon source
L-Arabinose (C); with MOPS
-0.3
+0.3
+0.0
+0.2
+0.3
carbon source
NAG (C); with MOPS
+0.1
-0.0
+0.1
+0.1
+0.2
carbon source
Trisodium citrate (C)
+0.3
-0.1
+0.3
-0.1
+0.2
carbon source
L-Arabinose (C)
-0.1
+0.1
+0.1
+0.2
+0.2
carbon source
D-Glucose (C)
+0.2
+0.1
+0.0
+0.2
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.1
-0.0
+0.2
+0.2
+0.2
carbon source
Trisodium citrate (C); with MOPS
+0.0
-0.0
+0.3
-0.0
+0.4
carbon source
acetate (C)
-0.1
+0.2
-0.0
+0.5
+0.1
carbon source
succinate (C)
+0.3
+0.0
+0.2
-0.0
+0.2
carbon source
succinate (C)
+0.2
-0.0
+0.2
+0.1
+0.2
carbon source
succinate (C); with MOPS
+0.4
+0.1
+0.1
+0.1
+0.3
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