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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS28645 and PFLU_RS28650 are separated by 22 nucleotides
PFLU_RS28650 and PFLU_RS28655 are separated by 143 nucleotides
PFLU_RS28655 and PFLU_RS28660 are separated by 102 nucleotides
PFLU_RS28660 and PFLU_RS28665 are separated by 40 nucleotides
PFLU_RS28645: PFLU_RS28645 - phosphoenolpyruvate--protein phosphotransferase, at 6,373,734 to 6,376,013
_RS28645
PFLU_RS28650: PFLU_RS28650 - RNA pyrophosphohydrolase, at 6,376,036 to 6,376,515
_RS28650
PFLU_RS28655: PFLU_RS28655 - HAD family hydrolase, at 6,376,659 to 6,377,315
_RS28655
PFLU_RS28660: PFLU_RS28660 - DUF2269 family protein, at 6,377,418 to 6,377,831
_RS28660
PFLU_RS28665: PFLU_RS28665 - threonine ammonia-lyase, biosynthetic, at 6,377,872 to 6,379,386
_RS28665
Group
Condition
PFLU
_RS28645
PFLU
_RS28650
PFLU
_RS28655
PFLU
_RS28660
PFLU
_RS28665
carbon source
L-Arabinose (C)
-5.9
-5.2
-4.1
+0.2
-0.2
carbon source
NAG (C); with MOPS
-5.9
-4.4
-3.5
-0.1
-1.3
carbon source
L-Arabinose (C); with MOPS
-6.8
-4.3
-4.2
+0.0
+0.4
carbon source
acetate (C)
-4.9
-5.0
-4.0
+0.2
-0.9
carbon source
NAG (C); with MOPS
-6.1
-3.4
-3.4
-0.2
-1.5
carbon source
NAG (C); with MOPS
-5.6
-4.1
-3.3
-0.0
-1.2
carbon source
L-Arabinose (C)
-5.6
-4.6
-3.9
+0.4
+0.0
carbon source
L-Arabinose (C)
-4.9
-4.9
-3.8
-0.2
+0.1
carbon source
acetate (C)
-4.9
-3.8
-4.1
+0.3
-0.7
carbon source
L-Arabinose (C); with MOPS
-6.1
-2.9
-4.1
+0.4
+0.2
carbon source
acetate (C)
-4.6
-3.0
-4.6
+0.5
-0.7
carbon source
L-Arabinose (C); with MOPS
-5.6
-3.6
-4.2
+0.4
+0.5
carbon source
Trisodium citrate (C)
-3.2
-1.9
-4.4
-0.4
-1.0
carbon source
succinate (C)
-3.9
-1.2
-4.2
-0.2
-0.7
carbon source
NAG (C)
-3.6
-0.9
-3.3
+0.0
-2.4
carbon source
Trisodium citrate (C)
-2.5
-2.3
-4.4
-0.2
-0.8
carbon source
Trisodium citrate (C)
-1.8
-2.1
-4.4
-0.2
-1.0
carbon source
NAG (C)
-3.7
-0.4
-3.0
-0.1
-2.2
carbon source
D-Glucose (C); with MOPS
-3.0
-2.2
-2.9
-0.3
-0.4
carbon source
D-Glucose (C); with MOPS
-2.8
-1.9
-2.9
+0.0
-0.4
carbon source
D-Glucose (C)
-2.8
-1.4
-3.1
+0.0
-0.2
carbon source
succinate (C)
-1.0
-0.9
-4.2
-0.4
-0.9
carbon source
D-Glucose (C)
-2.7
-1.7
-2.9
+0.4
-0.2
carbon source
Trisodium citrate (C); with MOPS
-0.1
-1.2
-4.4
-0.1
-1.1
carbon source
D-Glucose (C); with MOPS
-3.4
-1.1
-1.6
-0.0
-0.4
carbon source
acetate (C)
-2.1
-0.0
-2.9
-0.1
-1.4
carbon source
Trisodium citrate (C); with MOPS
-0.2
-1.7
-3.5
-0.0
-1.0
carbon source
succinate (C)
-0.8
-1.2
-3.9
+0.1
-0.6
carbon source
D,L-Lactate (C)
+1.3
-0.2
-4.1
-0.6
-1.5
carbon source
D,L-Lactate (C)
+1.8
+0.1
-3.8
-0.0
-1.4
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