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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS28585 and PFLU_RS28590 overlap by 1 nucleotides
PFLU_RS28590 and PFLU_RS28595 are separated by 125 nucleotides
PFLU_RS28595 and PFLU_RS28600 are separated by 18 nucleotides
PFLU_RS28600 and PFLU_RS28605 are separated by 1 nucleotides
PFLU_RS28585: PFLU_RS28585 - HD domain-containing protein, at 6,360,399 to 6,360,950
_RS28585
PFLU_RS28590: PFLU_RS28590 - TIGR03364 family FAD-dependent oxidoreductase, at 6,360,950 to 6,362,083
_RS28590
PFLU_RS28595: PFLU_RS28595 - putative 2-aminoethylphosphonate ABC transporter substrate-binding protein, at 6,362,209 to 6,363,231
_RS28595
PFLU_RS28600: PFLU_RS28600 - putative 2-aminoethylphosphonate ABC transporter permease subunit, at 6,363,250 to 6,364,956
_RS28600
PFLU_RS28605: PFLU_RS28605 - putative 2-aminoethylphosphonate ABC transporter ATP-binding protein, at 6,364,958 to 6,366,022
_RS28605
Group
Condition
PFLU
_RS28585
PFLU
_RS28590
PFLU
_RS28595
PFLU
_RS28600
PFLU
_RS28605
carbon source
L-Arabinose (C)
-0.1
-0.2
-0.2
+0.2
-0.1
carbon source
succinate (C)
+0.0
+0.0
-0.1
-0.0
-0.3
carbon source
D,L-Lactate (C)
+0.0
-0.1
+0.1
+0.1
-0.6
carbon source
D-Glucose (C)
-0.2
-0.0
-0.1
+0.1
-0.1
carbon source
NAG (C)
-0.0
-0.2
+0.1
+0.0
-0.0
carbon source
acetate (C)
+0.1
-0.1
-0.0
+0.0
-0.1
carbon source
acetate (C)
-0.1
-0.1
+0.1
-0.1
+0.1
carbon source
D,L-Lactate (C)
+0.0
-0.1
+0.1
+0.1
-0.1
carbon source
succinate (C); with MOPS
+0.1
+0.0
+0.1
-0.0
-0.2
carbon source
D-Xylose (C)
+0.2
-0.0
-0.0
-0.1
-0.0
carbon source
succinate (C); with MOPS
+0.0
+0.1
-0.1
-0.0
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.2
-0.0
-0.3
+0.1
+0.1
carbon source
D-Glucose (C); with MOPS
+0.1
+0.1
-0.2
+0.0
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.1
+0.1
-0.0
+0.1
-0.1
carbon source
acetate (C)
+0.1
+0.1
+0.4
-0.0
-0.2
carbon source
D-Xylose (C)
+0.1
+0.1
-0.1
+0.0
+0.3
carbon source
D-Glucose (C); with MOPS
+0.2
-0.1
+0.2
+0.0
-0.0
carbon source
Trisodium citrate (C)
+0.3
+0.1
+0.1
-0.0
-0.1
carbon source
D-Glucose (C)
+0.4
+0.1
+0.0
-0.0
-0.0
carbon source
acetate (C)
-0.1
+0.0
+0.4
+0.0
+0.1
carbon source
L-Arabinose (C)
+0.1
+0.1
+0.0
-0.0
+0.3
carbon source
D-Glucose (C); with MOPS
+0.3
-0.0
+0.1
+0.1
+0.1
carbon source
NAG (C); with MOPS
+0.3
+0.1
+0.1
+0.1
+0.1
carbon source
D-Glucose (C)
+0.2
+0.2
+0.2
+0.0
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.4
-0.1
+0.2
+0.1
+0.0
carbon source
L-Arabinose (C)
+0.3
-0.3
-0.0
+0.0
+0.6
carbon source
NAG (C); with MOPS
+0.3
+0.1
+0.1
-0.0
+0.2
carbon source
acetate (C)
+0.1
+0.2
+0.3
+0.1
-0.1
carbon source
L-Arabinose (C); with MOPS
+0.4
+0.2
+0.1
-0.1
+0.2
carbon source
succinate (C)
+0.3
+0.3
+0.0
+0.0
+0.4
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