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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS28550 and PFLU_RS28555 are separated by 213 nucleotides
PFLU_RS28555 and PFLU_RS28560 are separated by 242 nucleotides
PFLU_RS28560 and PFLU_RS28565 are separated by 61 nucleotides
PFLU_RS28565 and PFLU_RS28570 are separated by 69 nucleotides
PFLU_RS28550: PFLU_RS28550 - RNA polymerase sigma factor, at 6,352,838 to 6,353,371
_RS28550
PFLU_RS28555: PFLU_RS28555 - hypothetical protein, at 6,353,585 to 6,354,643
_RS28555
PFLU_RS28560: PFLU_RS28560 - L-cystine transporter, at 6,354,886 to 6,356,277
_RS28560
PFLU_RS28565: PFLU_RS28565 - dihydrofolate reductase, at 6,356,339 to 6,356,884
_RS28565
PFLU_RS28570: PFLU_RS28570 - DUF2868 domain-containing protein, at 6,356,954 to 6,358,333
_RS28570
Group
Condition
PFLU
_RS28550
PFLU
_RS28555
PFLU
_RS28560
PFLU
_RS28565
PFLU
_RS28570
carbon source
NAG (C); with MOPS
-0.2
+0.1
-0.2
N.D.
-0.6
carbon source
succinate (C)
-0.0
-0.2
+0.2
N.D.
-0.8
carbon source
L-Arabinose (C)
-0.2
-0.0
-0.0
N.D.
-0.3
carbon source
acetate (C)
+0.2
+0.0
-0.0
N.D.
-0.5
carbon source
D-Glucose (C)
+0.4
+0.1
+0.2
N.D.
-0.8
carbon source
D-Glucose (C); with MOPS
-0.3
+0.1
+0.1
N.D.
-0.0
carbon source
D-Xylose (C)
+0.1
-0.1
+0.0
N.D.
-0.1
carbon source
D-Glucose (C)
+0.1
+0.2
-0.0
N.D.
-0.3
carbon source
Trisodium citrate (C); with MOPS
+0.0
+0.1
-0.2
N.D.
+0.1
carbon source
Trisodium citrate (C)
-0.2
-0.1
+0.2
N.D.
+0.1
carbon source
acetate (C)
-0.2
+0.0
-0.0
N.D.
+0.2
carbon source
L-Arabinose (C); with MOPS
+0.0
+0.1
+0.2
N.D.
-0.2
carbon source
NAG (C); with MOPS
+0.1
+0.1
+0.0
N.D.
-0.2
carbon source
L-Arabinose (C); with MOPS
+0.0
-0.1
-0.0
N.D.
+0.3
carbon source
succinate (C); with MOPS
+0.1
+0.1
+0.1
N.D.
-0.2
carbon source
Trisodium citrate (C); with MOPS
+0.2
+0.1
+0.3
N.D.
-0.4
carbon source
D,L-Lactate (C)
+0.1
-0.0
-0.2
N.D.
+0.4
carbon source
Trisodium citrate (C)
+0.2
-0.0
+0.1
N.D.
+0.0
carbon source
succinate (C)
+0.1
-0.1
+0.3
N.D.
+0.0
carbon source
succinate (C)
+0.2
-0.1
+0.1
N.D.
+0.2
carbon source
NAG (C)
+0.1
-0.0
+0.2
N.D.
+0.2
carbon source
NAG (C); with MOPS
-0.0
-0.0
+0.1
N.D.
+0.4
carbon source
D-Glucose (C); with MOPS
+0.4
-0.0
+0.1
N.D.
-0.1
carbon source
L-Arabinose (C); with MOPS
+0.4
+0.0
+0.1
N.D.
-0.1
carbon source
D-Glucose (C)
-0.0
+0.1
-0.1
N.D.
+0.5
carbon source
acetate (C)
+0.0
+0.0
-0.4
N.D.
+0.8
carbon source
acetate (C)
+0.1
-0.0
+0.2
N.D.
+0.3
carbon source
L-Arabinose (C)
-0.1
-0.0
+0.3
N.D.
+0.7
carbon source
L-Arabinose (C)
+0.4
+0.0
+0.4
N.D.
+0.1
carbon source
acetate (C)
+0.1
+0.0
+0.5
N.D.
+0.4
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