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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS27960 and PFLU_RS31835 are separated by 4 nucleotides
PFLU_RS31835 and PFLU_RS27965 are separated by 196 nucleotides
PFLU_RS27965 and PFLU_RS27970 are separated by 68 nucleotides
PFLU_RS27970 and PFLU_RS27975 overlap by 4 nucleotides
PFLU_RS27960: PFLU_RS27960 - L-serine ammonia-lyase, at 6,223,161 to 6,224,537
_RS27960
PFLU_RS31835: PFLU_RS31835 - hypothetical protein, at 6,224,542 to 6,224,757
_RS31835
PFLU_RS27965: PFLU_RS27965 - choline ABC transporter substrate-binding protein, at 6,224,954 to 6,225,901
_RS27965
PFLU_RS27970: PFLU_RS27970 - choline ABC transporter permease subunit, at 6,225,970 to 6,226,815
_RS27970
PFLU_RS27975: PFLU_RS27975 - choline ABC transporter ATP-binding protein, at 6,226,812 to 6,227,990
_RS27975
Group
Condition
PFLU
_RS27960
PFLU
_RS31835
PFLU
_RS27965
PFLU
_RS27970
PFLU
_RS27975
carbon source
D-Glucose (C); with MOPS
+0.2
-3.1
+0.2
+0.2
-0.0
carbon source
NAG (C); with MOPS
-0.0
-2.1
-0.0
+0.3
+0.5
carbon source
succinate (C)
-0.1
-1.4
+0.1
-0.1
+0.5
carbon source
acetate (C)
+0.2
-1.8
+0.1
+0.3
+0.2
carbon source
D-Glucose (C)
+0.1
-0.7
-0.1
+0.2
+0.0
carbon source
D-Glucose (C); with MOPS
-0.1
-0.7
-0.0
+0.1
+0.4
carbon source
D-Glucose (C); with MOPS
-0.3
-0.3
-0.1
+0.2
+0.2
carbon source
succinate (C); with MOPS
-0.1
-0.4
+0.1
+0.3
-0.0
carbon source
succinate (C)
+0.2
-0.9
+0.1
+0.2
+0.4
carbon source
L-Arabinose (C)
+0.2
-0.7
+0.0
+0.3
+0.1
carbon source
L-Arabinose (C)
+0.3
-0.8
+0.3
+0.3
-0.0
carbon source
L-Arabinose (C)
+0.4
-0.5
+0.1
+0.2
-0.1
carbon source
acetate (C)
-0.2
-0.1
+0.1
+0.0
+0.4
carbon source
D-Glucose (C)
+0.1
+0.3
-0.4
+0.2
+0.0
carbon source
acetate (C)
+0.0
-0.4
-0.0
+0.5
+0.3
carbon source
D-Xylose (C)
-0.0
-0.2
+0.2
+0.1
+0.4
carbon source
L-Arabinose (C); with MOPS
-0.0
+0.3
-0.2
+0.3
+0.1
carbon source
Trisodium citrate (C)
-0.1
+0.2
+0.3
+0.2
-0.0
carbon source
Trisodium citrate (C); with MOPS
-0.1
+0.7
-0.1
+0.3
-0.2
carbon source
Trisodium citrate (C); with MOPS
+0.2
+0.9
-0.2
-0.2
-0.0
carbon source
Trisodium citrate (C); with MOPS
+0.2
-0.2
+0.0
+0.1
+0.4
carbon source
succinate (C); with MOPS
+0.0
+0.8
-0.1
-0.0
-0.0
carbon source
NAG (C)
+0.0
+0.1
+0.1
+0.4
+0.2
carbon source
D-Glucose (C)
+0.2
+0.2
+0.2
+0.4
+0.0
carbon source
NAG (C); with MOPS
+0.2
+0.1
+0.2
+0.1
+0.5
carbon source
acetate (C)
+0.1
+0.8
+0.1
-0.1
+0.3
carbon source
L-Arabinose (C); with MOPS
-0.2
+0.7
+0.1
+0.4
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.3
+0.5
-0.1
+0.4
+0.2
carbon source
NAG (C); with MOPS
-0.2
+1.1
+0.4
+0.2
+0.5
carbon source
acetate (C)
+0.1
+2.2
+0.2
+0.4
+0.5
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