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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS27635 and PFLU_RS27640 overlap by 8 nucleotides
PFLU_RS27640 and PFLU_RS27645 overlap by 8 nucleotides
PFLU_RS27645 and PFLU_RS27650 are separated by 176 nucleotides
PFLU_RS27650 and PFLU_RS27655 are separated by 92 nucleotides
PFLU_RS27635: PFLU_RS27635 - malonyl-ACP O-methyltransferase BioC, at 6,150,443 to 6,151,255
_RS27635
PFLU_RS27640: PFLU_RS27640 - alpha/beta fold hydrolase, at 6,151,248 to 6,151,979
_RS27640
PFLU_RS27645: PFLU_RS27645 - 8-amino-7-oxononanoate synthase, at 6,151,972 to 6,153,153
_RS27645
PFLU_RS27650: PFLU_RS27650 - biotin synthase BioB, at 6,153,330 to 6,154,385
_RS27650
PFLU_RS27655: PFLU_RS27655 - ComF family protein, at 6,154,478 to 6,155,215
_RS27655
Group
Condition
PFLU
_RS27635
PFLU
_RS27640
PFLU
_RS27645
PFLU
_RS27650
PFLU
_RS27655
carbon source
D-Glucose (C)
-2.7
-3.5
-2.7
-2.4
+0.3
carbon source
D-Glucose (C); with MOPS
-3.0
-2.3
-2.8
-2.6
+0.2
carbon source
D-Glucose (C)
-2.7
-2.3
-2.6
-2.4
+0.0
carbon source
D-Glucose (C); with MOPS
-1.8
-2.5
-2.3
-3.0
+0.1
carbon source
D-Glucose (C)
-2.4
-1.2
-2.6
-2.5
+0.1
carbon source
D-Glucose (C); with MOPS
-2.7
-1.0
-2.5
-2.3
+0.0
carbon source
L-Arabinose (C)
-1.3
-2.3
-1.3
-1.6
+0.3
carbon source
NAG (C); with MOPS
-0.0
+0.1
-1.1
-3.7
-0.1
carbon source
NAG (C); with MOPS
-0.1
+0.1
-0.9
-3.6
+0.1
carbon source
Trisodium citrate (C)
-1.0
-1.2
-0.8
-0.7
-0.3
carbon source
L-Arabinose (C)
-0.7
-0.9
-0.5
-1.4
-0.2
carbon source
NAG (C); with MOPS
-0.2
+0.3
-0.9
-3.3
+0.5
carbon source
Trisodium citrate (C); with MOPS
-0.8
-1.1
-0.7
-0.7
-0.0
carbon source
Trisodium citrate (C)
-0.6
-1.4
-0.6
-0.7
+0.1
carbon source
acetate (C)
-0.8
-0.1
-1.1
-1.1
+0.2
carbon source
L-Arabinose (C)
-0.5
-1.1
-0.5
-0.8
+0.2
carbon source
acetate (C)
-1.1
-0.1
-0.8
-0.7
-0.0
carbon source
succinate (C); with MOPS
-0.5
-0.9
-0.7
-0.5
+0.2
carbon source
L-Arabinose (C); with MOPS
-0.4
-0.1
-0.6
-1.3
+0.0
carbon source
acetate (C)
-0.3
-0.4
-0.8
-0.6
-0.1
carbon source
succinate (C); with MOPS
-0.6
-0.6
-0.4
-0.6
+0.0
carbon source
succinate (C); with MOPS
-0.4
-1.0
-0.3
-0.4
+0.1
carbon source
Trisodium citrate (C)
-1.0
+0.0
-0.6
-0.7
+0.3
carbon source
L-Arabinose (C); with MOPS
-0.4
-0.5
-0.3
-1.1
+0.3
carbon source
L-Arabinose (C); with MOPS
-0.4
-0.2
-0.5
-1.0
+0.2
carbon source
Trisodium citrate (C); with MOPS
-0.8
-0.2
-0.5
-0.6
+0.3
carbon source
Trisodium citrate (C); with MOPS
-0.7
+0.2
-0.4
-0.7
+0.3
carbon source
succinate (C)
-0.5
-0.5
-0.3
-0.3
+0.2
carbon source
succinate (C)
-0.4
-0.3
-0.4
-0.3
+0.1
carbon source
acetate (C)
-0.1
-1.1
-0.1
-0.0
+0.0
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