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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS27360 and PFLU_RS27365 are separated by 161 nucleotides
PFLU_RS27365 and PFLU_RS27370 overlap by 4 nucleotides
PFLU_RS27370 and PFLU_RS27375 are separated by 9 nucleotides
PFLU_RS27375 and PFLU_RS27380 are separated by 10 nucleotides
PFLU_RS27360: PFLU_RS27360 - lipoate--protein ligase family protein, at 6,085,786 to 6,086,481
_RS27360
PFLU_RS27365: PFLU_RS27365 - indole-3-glycerol phosphate synthase TrpC, at 6,086,643 to 6,087,479
_RS27365
PFLU_RS27370: PFLU_RS27370 - anthranilate phosphoribosyltransferase, at 6,087,476 to 6,088,525
_RS27370
PFLU_RS27375: PFLU_RS27375 - aminodeoxychorismate/anthranilate synthase component II, at 6,088,535 to 6,089,128
_RS27375
PFLU_RS27380: PFLU_RS27380 - anthranilate synthase component I, at 6,089,139 to 6,090,620
_RS27380
Group
Condition
PFLU
_RS27360
PFLU
_RS27365
PFLU
_RS27370
PFLU
_RS27375
PFLU
_RS27380
carbon source
acetate (C)
+0.1
-5.7
-5.9
-2.4
-1.9
carbon source
acetate (C)
-0.9
-5.6
-5.5
-1.5
-1.7
carbon source
acetate (C)
-0.4
-5.5
-5.5
-1.6
-1.5
carbon source
NAG (C); with MOPS
-0.3
-5.0
-5.7
-2.2
-1.2
carbon source
NAG (C); with MOPS
-0.1
-6.0
-5.5
-0.9
-1.3
carbon source
D,L-Lactate (C)
-0.4
-5.4
-5.1
-1.5
-1.2
carbon source
L-Arabinose (C); with MOPS
+0.0
-5.4
-4.8
-1.8
-1.3
carbon source
NAG (C)
+0.1
-5.1
-5.2
-1.2
-1.6
carbon source
L-Arabinose (C)
+0.1
-4.3
-5.6
-1.5
-1.4
carbon source
D-Xylose (C)
-0.0
-5.5
-5.0
-0.9
-1.0
carbon source
NAG (C); with MOPS
+0.2
-5.4
-5.5
-0.7
-0.9
carbon source
L-Arabinose (C); with MOPS
-0.5
-4.7
-4.9
-1.2
-1.0
carbon source
Trisodium citrate (C)
-0.1
-5.6
-4.6
-0.9
-1.0
carbon source
Trisodium citrate (C); with MOPS
+0.2
-5.1
-5.1
-1.2
-1.2
carbon source
acetate (C)
+0.0
-5.1
-4.8
-1.2
-1.2
carbon source
L-Arabinose (C)
-0.1
-4.2
-5.0
-1.2
-1.5
carbon source
D,L-Lactate (C)
+0.3
-4.6
-4.7
-1.5
-1.4
carbon source
NAG (C)
+0.0
-4.6
-4.6
-1.4
-1.3
carbon source
succinate (C); with MOPS
+0.4
-5.3
-4.8
-1.1
-1.1
carbon source
L-Arabinose (C); with MOPS
+0.3
-5.4
-4.4
-1.2
-1.1
carbon source
succinate (C); with MOPS
+0.1
-4.3
-4.8
-1.1
-1.0
carbon source
Trisodium citrate (C); with MOPS
+0.7
-4.6
-4.7
-1.0
-1.4
carbon source
L-Arabinose (C)
+0.4
-4.1
-4.7
-0.9
-1.7
carbon source
Trisodium citrate (C)
+0.1
-4.3
-4.4
-1.1
-1.4
carbon source
Trisodium citrate (C); with MOPS
+0.1
-4.6
-3.6
-1.4
-1.4
carbon source
Trisodium citrate (C)
-0.0
-4.3
-3.7
-1.3
-1.4
carbon source
succinate (C)
+0.5
-4.0
-3.9
-1.8
-1.0
carbon source
succinate (C); with MOPS
+0.1
-4.0
-3.9
-1.4
-0.9
carbon source
D-Xylose (C)
+0.3
-3.4
-5.4
-0.5
-1.0
carbon source
acetate (C)
-0.1
-4.0
-3.6
-1.0
-1.2
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