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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS26970 and PFLU_RS26975 overlap by 4 nucleotides
PFLU_RS26975 and PFLU_RS26980 overlap by 11 nucleotides
PFLU_RS26980 and PFLU_RS26985 are separated by 65 nucleotides
PFLU_RS26985 and PFLU_RS26990 overlap by 11 nucleotides
PFLU_RS26970: PFLU_RS26970 - endonuclease/exonuclease/phosphatase family protein, at 6,019,407 to 6,020,186
_RS26970
PFLU_RS26975: PFLU_RS26975 - cardiolipin synthase ClsB, at 6,020,183 to 6,021,445
_RS26975
PFLU_RS26980: PFLU_RS26980 - UPF0104 family protein, at 6,021,435 to 6,022,391
_RS26980
PFLU_RS26985: PFLU_RS26985 - alpha/beta fold hydrolase, at 6,022,457 to 6,023,212
_RS26985
PFLU_RS26990: PFLU_RS26990 - DUF3182 family protein, at 6,023,202 to 6,024,311
_RS26990
Group
Condition
PFLU
_RS26970
PFLU
_RS26975
PFLU
_RS26980
PFLU
_RS26985
PFLU
_RS26990
carbon source
acetate (C)
-0.2
-0.2
+0.0
-0.4
-0.0
carbon source
D-Xylose (C)
-0.2
-0.0
-0.2
+0.0
-0.1
carbon source
NAG (C)
-0.1
-0.1
-0.2
-0.1
-0.1
carbon source
NAG (C)
-0.2
+0.0
+0.1
-0.3
+0.0
carbon source
D-Glucose (C); with MOPS
-0.2
+0.0
+0.1
-0.2
-0.0
carbon source
succinate (C)
-0.2
+0.1
-0.0
-0.2
-0.0
carbon source
L-Arabinose (C); with MOPS
+0.2
+0.1
-0.2
-0.4
+0.1
carbon source
succinate (C); with MOPS
+0.0
+0.0
+0.1
-0.5
+0.1
carbon source
D-Glucose (C)
-0.0
+0.1
+0.1
-0.3
-0.1
carbon source
Trisodium citrate (C); with MOPS
-0.4
+0.0
+0.1
-0.0
+0.1
carbon source
acetate (C)
-0.1
-0.0
-0.0
-0.2
+0.2
carbon source
L-Arabinose (C); with MOPS
-0.0
+0.2
+0.2
-0.3
-0.1
carbon source
L-Arabinose (C); with MOPS
+0.1
+0.0
-0.2
+0.4
-0.3
carbon source
Trisodium citrate (C); with MOPS
-0.2
+0.1
-0.0
-0.1
+0.2
carbon source
D-Glucose (C); with MOPS
+0.1
+0.0
+0.0
+0.1
-0.2
carbon source
Trisodium citrate (C)
-0.1
+0.1
+0.1
-0.2
+0.1
carbon source
D-Glucose (C)
+0.3
+0.1
-0.1
-0.1
+0.1
carbon source
succinate (C)
+0.2
+0.2
-0.0
-0.2
+0.1
carbon source
NAG (C); with MOPS
+0.2
+0.0
+0.1
+0.0
-0.2
carbon source
NAG (C); with MOPS
+0.1
+0.1
-0.1
+0.1
-0.0
carbon source
Trisodium citrate (C)
+0.2
+0.0
-0.0
-0.0
+0.0
carbon source
L-Arabinose (C)
+0.2
+0.0
+0.1
-0.1
-0.0
carbon source
acetate (C)
+0.4
-0.1
-0.1
-0.1
+0.2
carbon source
succinate (C); with MOPS
+0.0
+0.1
-0.0
+0.1
+0.1
carbon source
D-Xylose (C)
+0.1
-0.1
+0.1
+0.1
+0.2
carbon source
acetate (C)
+0.4
-0.0
+0.3
-0.2
+0.1
carbon source
L-Arabinose (C)
+0.1
+0.1
+0.1
-0.0
+0.2
carbon source
Trisodium citrate (C)
+0.1
-0.0
+0.2
+0.3
+0.0
carbon source
NAG (C); with MOPS
+0.3
+0.3
+0.1
+0.0
+0.2
carbon source
L-Arabinose (C)
+0.1
+0.1
+0.2
+0.2
+0.3
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