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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS26140 and PFLU_RS26145 are separated by 7 nucleotides
PFLU_RS26145 and PFLU_RS26150 are separated by 320 nucleotides
PFLU_RS26150 and PFLU_RS26155 are separated by 269 nucleotides
PFLU_RS26155 and PFLU_RS26160 are separated by 92 nucleotides
PFLU_RS26140: PFLU_RS26140 - hypothetical protein, at 5,841,741 to 5,843,564
_RS26140
PFLU_RS26145: PFLU_RS26145 - hypothetical protein, at 5,843,572 to 5,843,889
_RS26145
PFLU_RS26150: PFLU_RS26150 - ATP-binding protein, at 5,844,210 to 5,846,648
_RS26150
PFLU_RS26155: PFLU_RS26155 - DUF3015 domain-containing protein, at 5,846,918 to 5,847,406
_RS26155
PFLU_RS26160: PFLU_RS26160 - DUF4105 domain-containing protein, at 5,847,499 to 5,849,352
_RS26160
Group
Condition
PFLU
_RS26140
PFLU
_RS26145
PFLU
_RS26150
PFLU
_RS26155
PFLU
_RS26160
carbon source
L-Arabinose (C); with MOPS
-0.0
-2.9
-1.2
+0.4
-0.1
carbon source
L-Arabinose (C); with MOPS
+0.0
-1.4
-1.6
+0.3
-0.1
carbon source
L-Arabinose (C)
-0.2
-0.5
-2.1
+0.1
+0.2
carbon source
NAG (C); with MOPS
+0.2
-1.4
-1.2
+0.4
+0.1
carbon source
acetate (C)
+0.1
+0.1
-1.2
-0.6
+0.1
carbon source
L-Arabinose (C); with MOPS
-0.1
-0.6
-1.1
+0.1
+0.2
carbon source
succinate (C)
-0.3
-0.7
-0.3
-0.1
+0.0
carbon source
L-Arabinose (C)
+0.0
+0.2
-1.8
+0.0
+0.4
carbon source
NAG (C)
-0.0
-0.7
-0.4
+0.0
+0.0
carbon source
NAG (C); with MOPS
-0.1
-0.0
-1.2
+0.0
+0.2
carbon source
NAG (C); with MOPS
+0.2
-0.2
-1.1
+0.2
-0.0
carbon source
L-Arabinose (C)
+0.0
+0.9
-2.0
+0.2
-0.1
carbon source
Trisodium citrate (C)
+0.1
-0.4
-0.7
+0.2
+0.0
carbon source
D-Glucose (C); with MOPS
-0.0
-0.1
-0.6
+0.1
+0.1
carbon source
Trisodium citrate (C); with MOPS
-0.0
-0.1
-0.5
+0.2
-0.0
carbon source
Trisodium citrate (C)
+0.0
-0.0
-0.7
-0.1
+0.2
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.2
-0.5
-0.0
+0.2
carbon source
D-Glucose (C)
-0.0
+0.1
-0.5
+0.1
+0.0
carbon source
D,L-Lactate (C)
-0.1
-0.4
+0.1
+0.0
+0.2
carbon source
D-Glucose (C); with MOPS
+0.1
+0.2
-0.4
+0.1
-0.1
carbon source
Trisodium citrate (C)
+0.0
+0.1
-0.6
+0.0
+0.2
carbon source
D-Glucose (C)
+0.1
+0.7
-0.4
-0.1
-0.2
carbon source
D-Glucose (C); with MOPS
+0.0
+0.0
-0.4
+0.2
+0.2
carbon source
NAG (C)
-0.0
+0.3
-0.4
+0.1
+0.2
carbon source
D-Xylose (C)
-0.0
+0.7
-0.3
-0.2
-0.1
carbon source
acetate (C)
+0.4
+0.2
-1.0
+0.1
+0.5
carbon source
Trisodium citrate (C); with MOPS
+0.1
+1.0
-0.8
-0.1
+0.1
carbon source
succinate (C); with MOPS
-0.1
+0.9
-0.2
-0.1
+0.2
carbon source
D-Xylose (C)
-0.0
+1.0
-0.2
+0.0
+0.1
carbon source
acetate (C)
-0.3
+2.7
-1.0
+0.5
+0.0
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