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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS25940 and PFLU_RS25945 are separated by 250 nucleotides
PFLU_RS25945 and PFLU_RS25950 are separated by 69 nucleotides
PFLU_RS25950 and PFLU_RS25955 are separated by 150 nucleotides
PFLU_RS25955 and PFLU_RS25960 are separated by 674 nucleotides
PFLU_RS25940: PFLU_RS25940 - FCD domain-containing protein, at 5,792,182 to 5,792,949
_RS25940
PFLU_RS25945: PFLU_RS25945 - L-lactate permease, at 5,793,200 to 5,794,894
_RS25945
PFLU_RS25950: PFLU_RS25950 - FAD-binding oxidoreductase, at 5,794,964 to 5,797,774
_RS25950
PFLU_RS25955: PFLU_RS25955 - hypothetical protein, at 5,797,925 to 5,798,203
_RS25955
PFLU_RS25960: PFLU_RS25960 - DUF4102 domain-containing protein, at 5,798,878 to 5,800,083
_RS25960
Group
Condition
PFLU
_RS25940
PFLU
_RS25945
PFLU
_RS25950
PFLU
_RS25955
PFLU
_RS25960
carbon source
NAG (C); with MOPS
-0.0
-0.0
-0.2
-3.1
+0.0
carbon source
D,L-Lactate (C)
+0.4
-1.7
-0.7
-1.2
-0.1
carbon source
D,L-Lactate (C)
+0.2
-1.2
-0.7
-0.6
-0.1
carbon source
NAG (C)
-0.2
+0.1
+0.0
-1.0
-0.0
carbon source
D-Xylose (C)
-0.5
+0.0
-0.1
-0.3
-0.1
carbon source
L-Arabinose (C)
+0.0
-0.0
-0.3
-0.6
+0.0
carbon source
L-Arabinose (C); with MOPS
+0.2
-0.0
-0.1
-0.7
-0.2
carbon source
acetate (C)
-0.7
-0.2
-0.2
+0.2
+0.0
carbon source
acetate (C)
-0.4
+0.0
-0.3
-0.1
+0.0
carbon source
succinate (C)
-0.1
-0.0
-0.2
-0.4
-0.0
carbon source
acetate (C)
-0.2
-0.0
+0.1
-0.5
-0.0
carbon source
acetate (C)
-0.4
+0.1
-0.0
-0.2
+0.1
carbon source
acetate (C)
-0.4
+0.1
+0.2
-0.4
+0.0
carbon source
succinate (C)
-0.1
-0.1
-0.1
-0.2
+0.1
carbon source
D-Xylose (C)
-0.7
+0.0
-0.0
+0.2
+0.1
carbon source
D-Glucose (C); with MOPS
-0.0
+0.1
-0.1
-0.4
+0.1
carbon source
D-Glucose (C); with MOPS
-0.2
+0.0
-0.3
+0.1
-0.0
carbon source
Trisodium citrate (C)
+0.3
+0.1
-0.0
-0.8
+0.1
carbon source
Trisodium citrate (C)
+0.2
-0.1
-0.1
-0.3
-0.0
carbon source
succinate (C)
-0.2
-0.1
+0.1
+0.2
-0.0
carbon source
succinate (C); with MOPS
-0.3
+0.1
+0.0
+0.1
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.2
+0.3
-0.0
-0.4
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.2
-0.0
-0.0
+0.2
-0.1
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.1
+0.0
+0.2
+0.1
carbon source
D-Glucose (C); with MOPS
-0.1
+0.1
-0.1
+0.4
+0.1
carbon source
D-Glucose (C)
+0.0
-0.2
+0.1
+0.4
+0.1
carbon source
D-Glucose (C)
+0.1
+0.3
-0.1
+0.3
-0.0
carbon source
Trisodium citrate (C); with MOPS
+0.2
+0.0
+0.1
+0.5
-0.0
carbon source
L-Arabinose (C)
+0.1
+0.0
-0.0
+0.6
-0.0
carbon source
Trisodium citrate (C)
+0.2
-0.1
+0.0
+0.9
-0.0
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