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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS25460 and PFLU_RS25465 are separated by 144 nucleotides
PFLU_RS25465 and PFLU_RS25470 are separated by 126 nucleotides
PFLU_RS25470 and PFLU_RS25475 are separated by 41 nucleotides
PFLU_RS25475 and PFLU_RS25480 are separated by 12 nucleotides
PFLU_RS25460: PFLU_RS25460 - kynureninase, at 5,683,650 to 5,684,900
_RS25460
PFLU_RS25465: PFLU_RS25465 - Lrp/AsnC family transcriptional regulator, at 5,685,045 to 5,685,518
_RS25465
PFLU_RS25470: PFLU_RS25470 - catechol 1,2-dioxygenase, at 5,685,645 to 5,686,574
_RS25470
PFLU_RS25475: PFLU_RS25475 - muconolactone Delta-isomerase, at 5,686,616 to 5,686,906
_RS25475
PFLU_RS25480: PFLU_RS25480 - muconate cycloisomerase, at 5,686,919 to 5,688,046
_RS25480
Group
Condition
PFLU
_RS25460
PFLU
_RS25465
PFLU
_RS25470
PFLU
_RS25475
PFLU
_RS25480
carbon source
L-Arabinose (C)
-0.0
-0.2
+0.1
-0.3
-0.5
carbon source
D-Glucose (C); with MOPS
-0.4
-0.0
+0.0
-0.1
-0.5
carbon source
L-Arabinose (C); with MOPS
-0.0
-0.2
+0.3
+0.1
-1.0
carbon source
acetate (C)
+0.1
-0.3
-0.1
+0.2
-0.6
carbon source
NAG (C); with MOPS
-0.3
+0.1
-0.0
-0.1
-0.4
carbon source
NAG (C); with MOPS
-0.4
+0.2
-0.1
-0.2
-0.1
carbon source
D-Xylose (C)
-0.3
+0.2
-0.0
+0.0
-0.5
carbon source
D-Glucose (C); with MOPS
-0.6
+0.1
-0.0
+0.1
-0.1
carbon source
succinate (C); with MOPS
-0.0
-0.0
+0.1
-0.1
-0.3
carbon source
D-Glucose (C)
-0.6
+0.3
+0.1
-0.2
+0.0
carbon source
acetate (C)
+0.1
+0.1
-0.1
-0.1
-0.4
carbon source
NAG (C)
-0.5
+0.1
-0.0
-0.1
+0.2
carbon source
D-Glucose (C)
-0.5
+0.1
+0.0
-0.1
+0.1
carbon source
Trisodium citrate (C); with MOPS
-0.1
-0.1
-0.0
+0.1
-0.1
carbon source
D-Glucose (C); with MOPS
-0.4
+0.1
+0.2
-0.0
-0.2
carbon source
NAG (C); with MOPS
-0.1
+0.2
-0.1
-0.1
-0.1
carbon source
D-Glucose (C)
-0.7
+0.2
+0.0
+0.2
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.1
+0.0
+0.1
+0.1
-0.4
carbon source
NAG (C)
-0.3
+0.2
-0.1
+0.1
+0.0
carbon source
L-Arabinose (C)
-0.2
-0.2
+0.0
+0.3
-0.1
carbon source
L-Arabinose (C); with MOPS
-0.1
+0.2
-0.1
+0.1
-0.1
carbon source
acetate (C)
+0.1
-0.1
+0.1
+0.4
-0.2
carbon source
Trisodium citrate (C)
-0.1
+0.1
-0.1
+0.2
+0.2
carbon source
succinate (C); with MOPS
+0.0
+0.2
-0.1
+0.1
+0.1
carbon source
D,L-Lactate (C)
+0.0
+0.0
-0.1
-0.0
+0.5
carbon source
D,L-Lactate (C)
-0.1
+0.2
-0.1
+0.2
+0.2
carbon source
acetate (C)
+0.1
+0.2
+0.1
+0.1
+0.1
carbon source
L-Arabinose (C)
-0.0
+0.1
+0.0
+0.4
+0.3
carbon source
succinate (C)
+0.1
-0.0
+0.2
+0.2
+0.3
carbon source
succinate (C)
+0.1
-0.0
+0.1
+0.2
+0.6
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