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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS25285 and PFLU_RS25290 are separated by 61 nucleotides
PFLU_RS25290 and PFLU_RS25295 are separated by 2 nucleotides
PFLU_RS25295 and PFLU_RS25300 are separated by 175 nucleotides
PFLU_RS25300 and PFLU_RS25305 are separated by 57 nucleotides
PFLU_RS25285: PFLU_RS25285 - PAS domain S-box protein, at 5,652,431 to 5,652,898
_RS25285
PFLU_RS25290: PFLU_RS25290 - hypothetical protein, at 5,652,960 to 5,653,565
_RS25290
PFLU_RS25295: PFLU_RS25295 - MerR family transcriptional regulator, at 5,653,568 to 5,654,563
_RS25295
PFLU_RS25300: PFLU_RS25300 - antibiotic biosynthesis monooxygenase, at 5,654,739 to 5,655,299
_RS25300
PFLU_RS25305: PFLU_RS25305 - dihydromonapterin reductase, at 5,655,357 to 5,656,067
_RS25305
Group
Condition
PFLU
_RS25285
PFLU
_RS25290
PFLU
_RS25295
PFLU
_RS25300
PFLU
_RS25305
carbon source
NAG (C); with MOPS
+0.1
-0.5
+0.2
+0.0
-2.6
carbon source
NAG (C)
+0.1
+0.2
+0.1
+0.1
-2.6
carbon source
NAG (C); with MOPS
+0.3
-0.5
+0.1
+0.2
-1.9
carbon source
NAG (C)
-0.0
+0.3
+0.1
+0.1
-2.0
carbon source
NAG (C); with MOPS
+0.4
-0.0
+0.2
+0.3
-1.7
carbon source
D-Glucose (C); with MOPS
+0.0
-0.4
-0.1
+0.0
-0.2
carbon source
Trisodium citrate (C); with MOPS
+0.2
-0.3
-0.1
-0.3
+0.1
carbon source
D-Glucose (C); with MOPS
+0.2
-0.7
+0.1
+0.2
-0.1
carbon source
Trisodium citrate (C); with MOPS
+0.2
-0.4
+0.0
-0.2
+0.2
carbon source
acetate (C)
+0.5
-0.4
+0.0
-0.4
+0.0
carbon source
Trisodium citrate (C)
+0.1
-0.4
-0.1
+0.1
+0.1
carbon source
succinate (C); with MOPS
+0.2
-0.4
+0.0
-0.1
+0.1
carbon source
D-Glucose (C); with MOPS
+0.2
-0.4
-0.1
+0.0
+0.0
carbon source
D-Glucose (C)
+0.1
-0.5
+0.1
+0.1
+0.1
carbon source
D-Glucose (C)
+0.2
-0.5
+0.1
+0.1
+0.1
carbon source
D-Glucose (C)
+0.2
-0.4
-0.1
+0.1
+0.1
carbon source
succinate (C)
+0.5
-0.4
-0.1
+0.0
+0.2
carbon source
Trisodium citrate (C); with MOPS
+0.2
-0.3
+0.0
+0.2
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.1
-0.6
+0.2
+0.2
+0.4
carbon source
acetate (C)
-0.2
+0.3
+0.1
+0.2
-0.1
carbon source
Trisodium citrate (C)
+0.4
-0.3
+0.1
+0.1
+0.2
carbon source
succinate (C); with MOPS
+0.2
-0.1
-0.0
+0.1
+0.3
carbon source
L-Arabinose (C)
-0.0
-0.1
+0.1
+0.3
+0.2
carbon source
succinate (C); with MOPS
+0.4
-0.2
+0.1
+0.3
-0.2
carbon source
acetate (C)
+0.5
-0.1
+0.0
-0.1
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.1
-0.2
+0.1
+0.2
+0.3
carbon source
acetate (C)
+0.3
-0.2
+0.1
+0.1
+0.2
carbon source
L-Arabinose (C); with MOPS
+0.2
-0.1
-0.0
-0.0
+0.7
carbon source
L-Arabinose (C)
+0.1
+0.6
-0.1
+0.1
+0.4
carbon source
L-Arabinose (C)
+0.0
+0.7
+0.3
-0.1
+0.6
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