Private Fitness
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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS25010 and PFLU_RS25015 are separated by 108 nucleotides
PFLU_RS25015 and PFLU_RS25020 are separated by 30 nucleotides
PFLU_RS25020 and PFLU_RS25025 are separated by 218 nucleotides
PFLU_RS25025 and PFLU_RS25030 are separated by 8 nucleotides
PFLU_RS25010: PFLU_RS25010 - cupin domain-containing protein, at 5,599,780 to 5,600,160
_RS25010
PFLU_RS25015: PFLU_RS25015 - hypothetical protein, at 5,600,269 to 5,600,553
_RS25015
PFLU_RS25020: PFLU_RS25020 - hypothetical protein, at 5,600,584 to 5,601,480
_RS25020
PFLU_RS25025: PFLU_RS25025 - hypothetical protein, at 5,601,699 to 5,602,028
_RS25025
PFLU_RS25030: PFLU_RS25030 - LysE family translocator, at 5,602,037 to 5,602,672
_RS25030
Group
Condition
PFLU
_RS25010
PFLU
_RS25015
PFLU
_RS25020
PFLU
_RS25025
PFLU
_RS25030
carbon source
Trisodium citrate (C); with MOPS
-0.0
-0.1
-0.1
-2.0
+0.2
carbon source
L-Arabinose (C)
-0.5
-0.3
-0.1
-0.9
-0.0
carbon source
Trisodium citrate (C)
-0.4
-0.2
-0.1
-0.4
-0.0
carbon source
D-Glucose (C)
-0.2
-0.6
+0.1
-0.3
-0.1
carbon source
L-Arabinose (C); with MOPS
-0.3
-0.5
+0.1
-0.5
+0.0
carbon source
succinate (C)
+0.2
-0.2
-0.1
-1.0
+0.0
carbon source
succinate (C); with MOPS
-0.2
-0.3
-0.1
-0.2
-0.1
carbon source
L-Arabinose (C); with MOPS
-0.4
-0.4
+0.2
-0.3
-0.2
carbon source
D-Glucose (C); with MOPS
+0.3
-0.1
+0.0
-0.8
-0.1
carbon source
L-Arabinose (C)
-0.1
-0.1
+0.0
-0.7
+0.2
carbon source
NAG (C); with MOPS
-0.4
+0.1
+0.1
-0.3
+0.0
carbon source
D-Glucose (C); with MOPS
-0.4
-0.2
-0.0
+0.0
+0.1
carbon source
succinate (C); with MOPS
+0.1
-0.2
+0.1
-0.4
-0.0
carbon source
Trisodium citrate (C)
-0.0
-0.1
+0.1
-0.5
+0.0
carbon source
D-Glucose (C)
-0.0
+0.1
+0.1
-0.3
-0.1
carbon source
acetate (C)
+0.1
+0.0
-0.0
-0.4
+0.1
carbon source
D-Glucose (C); with MOPS
-0.3
-0.3
+0.0
+0.4
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.1
+0.1
+0.0
-0.5
+0.3
carbon source
D-Glucose (C)
+0.0
-0.3
-0.1
+0.4
-0.0
carbon source
acetate (C)
+0.3
-0.1
-0.1
+0.0
-0.1
carbon source
NAG (C); with MOPS
+0.1
-0.5
-0.0
+0.3
+0.2
carbon source
succinate (C)
+0.2
-0.1
+0.0
+0.1
-0.2
carbon source
NAG (C)
-0.1
+0.2
-0.2
+0.1
+0.0
carbon source
acetate (C)
-0.3
+0.3
+0.0
+0.1
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.3
-0.1
+0.0
+0.7
-0.2
carbon source
D,L-Lactate (C)
-0.1
+0.2
-0.1
+0.6
+0.1
carbon source
L-Arabinose (C)
+0.1
-0.1
+0.2
+1.0
-0.2
carbon source
D,L-Lactate (C)
+0.0
+0.0
+0.1
+0.9
-0.0
carbon source
D-Xylose (C)
-0.1
+0.2
-0.0
+1.0
+0.0
carbon source
acetate (C)
+0.6
+0.2
-0.3
+1.0
+0.1
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