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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS24410 and PFLU_RS24415 overlap by 4 nucleotides
PFLU_RS24415 and PFLU_RS24420 are separated by 4 nucleotides
PFLU_RS24420 and PFLU_RS24425 are separated by 187 nucleotides
PFLU_RS24425 and PFLU_RS24430 overlap by 11 nucleotides
PFLU_RS24410: PFLU_RS24410 - hypothetical protein, at 5,470,791 to 5,471,018
_RS24410
PFLU_RS24415: PFLU_RS24415 - pH-inducible protein involved in stress response, at 5,471,015 to 5,471,734
_RS24415
PFLU_RS24420: PFLU_RS24420 - class I SAM-dependent methyltransferase, at 5,471,739 to 5,472,419
_RS24420
PFLU_RS24425: PFLU_RS24425 - HAMP domain-containing histidine kinase, at 5,472,607 to 5,473,887
_RS24425
PFLU_RS24430: PFLU_RS24430 - response regulator transcription factor, at 5,473,877 to 5,474,560
_RS24430
Group
Condition
PFLU
_RS24410
PFLU
_RS24415
PFLU
_RS24420
PFLU
_RS24425
PFLU
_RS24430
carbon source
succinate (C); with MOPS
N.D.
+0.0
-0.7
-0.1
-0.1
carbon source
D-Glucose (C); with MOPS
N.D.
-0.1
+0.2
+0.0
-0.7
carbon source
acetate (C)
N.D.
-0.1
-0.1
+0.0
-0.5
carbon source
succinate (C)
N.D.
+0.0
-0.2
-0.1
-0.2
carbon source
Trisodium citrate (C)
N.D.
-0.3
+0.0
+0.0
-0.2
carbon source
L-Arabinose (C); with MOPS
N.D.
+0.1
-0.4
+0.2
-0.4
carbon source
Trisodium citrate (C); with MOPS
N.D.
-0.1
+0.1
+0.0
-0.4
carbon source
D,L-Lactate (C)
N.D.
+0.1
-0.1
-0.1
-0.3
carbon source
D-Xylose (C)
N.D.
+0.1
+0.2
+0.1
-0.6
carbon source
D-Glucose (C)
N.D.
-0.1
+0.1
+0.2
-0.4
carbon source
D-Glucose (C)
N.D.
-0.2
+0.5
-0.0
-0.4
carbon source
NAG (C); with MOPS
N.D.
-0.2
+0.1
+0.1
-0.1
carbon source
succinate (C)
N.D.
+0.1
-0.1
+0.1
-0.2
carbon source
Trisodium citrate (C)
N.D.
-0.3
+0.3
+0.1
-0.2
carbon source
L-Arabinose (C)
N.D.
+0.3
-0.2
+0.2
-0.4
carbon source
Trisodium citrate (C); with MOPS
N.D.
-0.0
-0.3
+0.1
+0.2
carbon source
L-Arabinose (C)
N.D.
-0.0
+0.3
+0.1
-0.5
carbon source
D,L-Lactate (C)
N.D.
+0.2
+0.1
+0.0
-0.2
carbon source
succinate (C)
N.D.
+0.3
-0.2
+0.2
-0.0
carbon source
Trisodium citrate (C)
N.D.
-0.1
+0.3
+0.1
-0.0
carbon source
NAG (C)
N.D.
-0.1
+0.1
+0.2
+0.1
carbon source
acetate (C)
N.D.
+0.1
+0.4
-0.0
-0.0
carbon source
NAG (C); with MOPS
N.D.
+0.1
+0.1
+0.2
+0.1
carbon source
acetate (C)
N.D.
+0.2
+0.6
+0.2
-0.5
carbon source
succinate (C); with MOPS
N.D.
+0.4
+0.3
-0.0
-0.0
carbon source
D-Glucose (C); with MOPS
N.D.
+0.1
+0.1
+0.1
+0.4
carbon source
L-Arabinose (C); with MOPS
N.D.
+0.0
+0.4
+0.2
+0.1
carbon source
succinate (C); with MOPS
N.D.
+0.1
+0.5
+0.0
+0.2
carbon source
NAG (C); with MOPS
N.D.
+0.2
+0.1
+0.1
+0.4
carbon source
acetate (C)
N.D.
+0.2
+0.3
+0.1
+0.3
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