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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS24265 and PFLU_RS24270 are separated by 216 nucleotides
PFLU_RS24270 and PFLU_RS24275 are separated by 268 nucleotides
PFLU_RS24275 and PFLU_RS24280 overlap by 7 nucleotides
PFLU_RS24280 and PFLU_RS24285 are separated by 286 nucleotides
PFLU_RS24265: PFLU_RS24265 - iron-sulfur-binding ferredoxin reductase, at 5,431,806 to 5,432,738
_RS24265
PFLU_RS24270: PFLU_RS24270 - fumarate hydratase, at 5,432,955 to 5,434,478
_RS24270
PFLU_RS24275: PFLU_RS24275 - sensor histidine kinase, at 5,434,747 to 5,436,513
_RS24275
PFLU_RS24280: PFLU_RS24280 - sigma-54-dependent Fis family transcriptional regulator, at 5,436,507 to 5,437,832
_RS24280
PFLU_RS24285: PFLU_RS24285 - MFS transporter, at 5,438,119 to 5,439,438
_RS24285
Group
Condition
PFLU
_RS24265
PFLU
_RS24270
PFLU
_RS24275
PFLU
_RS24280
PFLU
_RS24285
carbon source
L-Arabinose (C)
-0.5
N.D.
+0.3
-1.0
+0.2
carbon source
L-Arabinose (C); with MOPS
-0.9
N.D.
-0.0
+0.3
+0.1
carbon source
NAG (C); with MOPS
-0.4
N.D.
+0.1
-0.2
+0.0
carbon source
succinate (C)
+0.2
N.D.
-0.0
-0.6
-0.1
carbon source
NAG (C); with MOPS
-0.2
N.D.
-0.1
-0.3
+0.1
carbon source
NAG (C); with MOPS
-0.5
N.D.
-0.0
-0.1
+0.2
carbon source
L-Arabinose (C); with MOPS
-0.4
N.D.
-0.3
+0.5
-0.0
carbon source
succinate (C); with MOPS
+0.1
N.D.
-0.2
+0.1
-0.2
carbon source
succinate (C)
-0.2
N.D.
-0.2
+0.3
-0.1
carbon source
Trisodium citrate (C); with MOPS
-0.1
N.D.
+0.1
-0.1
-0.0
carbon source
succinate (C); with MOPS
+0.3
N.D.
-0.2
+0.1
-0.2
carbon source
D-Glucose (C); with MOPS
-0.2
N.D.
+0.0
+0.2
-0.0
carbon source
D-Glucose (C); with MOPS
-0.2
N.D.
-0.0
+0.2
+0.0
carbon source
L-Arabinose (C)
-0.6
N.D.
+0.3
+0.4
+0.0
carbon source
NAG (C)
-0.2
N.D.
+0.1
+0.2
+0.1
carbon source
L-Arabinose (C); with MOPS
-0.4
N.D.
-0.0
+0.4
+0.2
carbon source
L-Arabinose (C)
-0.1
N.D.
+0.2
-0.1
+0.2
carbon source
D-Glucose (C); with MOPS
-0.4
N.D.
-0.0
+0.5
+0.1
carbon source
D,L-Lactate (C)
+0.2
N.D.
+0.1
-0.0
-0.0
carbon source
D,L-Lactate (C)
+0.2
N.D.
+0.0
+0.1
-0.0
carbon source
D-Glucose (C)
+0.2
N.D.
+0.1
-0.0
+0.0
carbon source
D-Xylose (C)
+0.1
N.D.
+0.3
-0.1
+0.1
carbon source
D-Glucose (C)
+0.0
N.D.
+0.2
+0.1
+0.1
carbon source
D-Glucose (C)
+0.4
N.D.
+0.1
-0.1
+0.1
carbon source
D-Xylose (C)
-0.0
N.D.
-0.0
+0.6
+0.0
carbon source
Trisodium citrate (C)
+0.4
N.D.
-0.1
+0.4
+0.1
carbon source
Trisodium citrate (C)
+0.3
N.D.
+0.2
+0.4
+0.1
carbon source
acetate (C)
+0.2
N.D.
+0.1
+0.3
+0.4
carbon source
acetate (C)
+0.2
N.D.
+0.4
+0.3
+0.5
carbon source
acetate (C)
+0.2
N.D.
+0.3
+0.7
+0.3
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