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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS24230 and PFLU_RS24235 overlap by 4 nucleotides
PFLU_RS24235 and PFLU_RS24240 are separated by 7 nucleotides
PFLU_RS24240 and PFLU_RS24245 are separated by 77 nucleotides
PFLU_RS24245 and PFLU_RS24250 are separated by 225 nucleotides
PFLU_RS24230: PFLU_RS24230 - DUF4350 domain-containing protein, at 5,424,761 to 5,425,930
_RS24230
PFLU_RS24235: PFLU_RS24235 - MoxR family ATPase, at 5,425,927 to 5,426,922
_RS24235
PFLU_RS24240: PFLU_RS24240 - DUF58 domain-containing protein, at 5,426,930 to 5,428,261
_RS24240
PFLU_RS24245: PFLU_RS24245 - PilZ domain-containing protein, at 5,428,339 to 5,428,698
_RS24245
PFLU_RS24250: PFLU_RS24250 - hypothetical protein, at 5,428,924 to 5,429,298
_RS24250
Group
Condition
PFLU
_RS24230
PFLU
_RS24235
PFLU
_RS24240
PFLU
_RS24245
PFLU
_RS24250
carbon source
NAG (C); with MOPS
-0.1
+0.5
-0.1
-2.0
-0.2
carbon source
NAG (C); with MOPS
-0.1
-0.1
-0.0
-1.4
-0.1
carbon source
NAG (C)
-0.1
-0.0
+0.1
-1.1
-0.4
carbon source
NAG (C); with MOPS
-0.1
-0.2
+0.1
-1.4
+0.0
carbon source
acetate (C)
-0.6
-0.2
-0.5
+0.1
-0.2
carbon source
NAG (C)
+0.0
-0.1
+0.1
-0.8
-0.6
carbon source
L-Arabinose (C); with MOPS
-0.2
-0.1
-0.0
-0.5
-0.5
carbon source
L-Arabinose (C)
-0.0
-0.2
-0.2
-0.2
-0.4
carbon source
succinate (C)
-0.3
-0.1
-0.1
-0.3
+0.0
carbon source
D-Xylose (C)
+0.0
+0.0
+0.0
-0.7
-0.0
carbon source
L-Arabinose (C); with MOPS
-0.2
+0.0
-0.2
-0.0
-0.3
carbon source
Trisodium citrate (C); with MOPS
-0.1
-0.2
-0.1
-0.0
-0.3
carbon source
Trisodium citrate (C)
-0.2
-0.2
-0.2
-0.0
-0.1
carbon source
D-Glucose (C)
-0.1
-0.1
-0.1
-0.5
+0.2
carbon source
D-Glucose (C); with MOPS
-0.1
+0.0
-0.0
-0.4
-0.0
carbon source
acetate (C)
-0.3
+0.0
-0.1
+0.2
-0.2
carbon source
D-Glucose (C); with MOPS
-0.2
+0.1
+0.0
-0.2
-0.1
carbon source
D-Xylose (C)
+0.2
-0.0
-0.0
-0.6
+0.2
carbon source
acetate (C)
-0.1
+0.2
-0.0
-0.6
+0.4
carbon source
succinate (C); with MOPS
+0.0
-0.1
-0.1
-0.2
+0.3
carbon source
succinate (C); with MOPS
-0.1
+0.1
-0.1
-0.3
+0.2
carbon source
L-Arabinose (C)
-0.1
+0.1
-0.2
+0.1
-0.0
carbon source
Trisodium citrate (C)
-0.2
-0.0
-0.2
+0.2
+0.1
carbon source
L-Arabinose (C); with MOPS
-0.2
+0.2
-0.1
-0.1
+0.2
carbon source
succinate (C); with MOPS
-0.1
-0.0
-0.1
-0.0
+0.4
carbon source
succinate (C)
-0.2
+0.1
+0.1
+0.0
+0.3
carbon source
Trisodium citrate (C)
-0.2
+0.3
-0.0
+0.0
+0.2
carbon source
L-Arabinose (C)
-0.2
+0.1
-0.2
+0.3
+0.4
carbon source
succinate (C)
+0.0
+0.3
-0.0
+0.3
-0.2
carbon source
acetate (C)
-0.0
+0.2
+0.2
-0.1
+0.2
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