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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS23735 and PFLU_RS23740 are separated by 103 nucleotides
PFLU_RS23740 and PFLU_RS23745 are separated by 84 nucleotides
PFLU_RS23745 and PFLU_RS23750 are separated by 2 nucleotides
PFLU_RS23750 and PFLU_RS23755 overlap by 8 nucleotides
PFLU_RS23735: PFLU_RS23735 - D-hexose-6-phosphate mutarotase, at 5,318,835 to 5,319,680
_RS23735
PFLU_RS23740: PFLU_RS23740 - porin, at 5,319,784 to 5,321,130
_RS23740
PFLU_RS23745: PFLU_RS23745 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 5,321,215 to 5,322,375
_RS23745
PFLU_RS23750: PFLU_RS23750 - carbohydrate ABC transporter permease, at 5,322,378 to 5,323,223
_RS23750
PFLU_RS23755: PFLU_RS23755 - sugar ABC transporter permease, at 5,323,216 to 5,324,124
_RS23755
Group
Condition
PFLU
_RS23735
PFLU
_RS23740
PFLU
_RS23745
PFLU
_RS23750
PFLU
_RS23755
carbon source
D-Xylose (C)
-0.1
-0.3
-1.7
-1.3
-1.3
carbon source
D-Xylose (C)
-0.3
-0.2
-1.1
-1.2
-1.2
carbon source
D-Glucose (C)
-0.3
+0.1
-0.3
-0.5
-0.4
carbon source
D-Glucose (C)
+0.1
+0.0
-0.5
-0.4
-0.4
carbon source
D-Glucose (C)
-0.0
-0.1
-0.1
-0.4
-0.4
carbon source
L-Arabinose (C)
+0.1
-0.2
-0.3
-0.2
-0.1
carbon source
D-Glucose (C); with MOPS
+0.3
-0.2
-0.4
-0.2
-0.2
carbon source
D-Glucose (C); with MOPS
+0.3
-0.1
-0.3
-0.2
-0.1
carbon source
NAG (C); with MOPS
+0.3
+0.2
-0.6
-0.2
-0.0
carbon source
L-Arabinose (C)
+0.0
-0.1
-0.3
+0.1
+0.0
carbon source
Trisodium citrate (C); with MOPS
-0.2
-0.0
+0.1
-0.1
-0.1
carbon source
D,L-Lactate (C)
-0.3
+0.1
-0.0
-0.1
+0.2
carbon source
NAG (C)
+0.4
+0.1
-0.4
-0.3
+0.0
carbon source
succinate (C); with MOPS
-0.2
+0.1
+0.1
-0.1
-0.1
carbon source
D-Glucose (C); with MOPS
+0.4
-0.1
-0.2
-0.2
-0.0
carbon source
NAG (C)
+0.5
+0.1
-0.3
-0.3
-0.0
carbon source
L-Arabinose (C); with MOPS
+0.3
-0.1
-0.1
-0.0
+0.1
carbon source
acetate (C)
-0.2
-0.1
+0.4
+0.1
-0.0
carbon source
L-Arabinose (C)
+0.3
-0.2
+0.1
-0.1
+0.1
carbon source
NAG (C); with MOPS
+0.5
+0.1
+0.1
-0.2
-0.2
carbon source
L-Arabinose (C); with MOPS
+0.3
-0.1
+0.2
-0.1
+0.1
carbon source
NAG (C); with MOPS
+0.5
-0.1
+0.0
-0.1
+0.0
carbon source
succinate (C); with MOPS
+0.3
+0.1
-0.1
-0.1
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.4
+0.0
+0.1
-0.2
+0.1
carbon source
succinate (C); with MOPS
-0.1
+0.0
+0.4
+0.0
+0.1
carbon source
Trisodium citrate (C)
+0.3
+0.1
-0.1
-0.0
+0.3
carbon source
succinate (C)
+0.0
+0.0
+0.3
+0.1
+0.1
carbon source
succinate (C)
+0.5
+0.1
+0.0
+0.1
-0.0
carbon source
acetate (C)
+0.7
+0.2
-0.2
+0.0
+0.2
carbon source
acetate (C)
+0.1
-0.0
+0.9
+0.1
-0.0
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