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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS23605 and PFLU_RS23610 are separated by 152 nucleotides
PFLU_RS23610 and PFLU_RS23615 are separated by 15 nucleotides
PFLU_RS23615 and PFLU_RS23620 are separated by 8 nucleotides
PFLU_RS23620 and PFLU_RS23625 are separated by 129 nucleotides
PFLU_RS23605: PFLU_RS23605 - hypothetical protein, at 5,294,812 to 5,295,237
_RS23605
PFLU_RS23610: PFLU_RS23610 - glutathione S-transferase family protein, at 5,295,390 to 5,296,022
_RS23610
PFLU_RS23615: PFLU_RS23615 - NAD(P)-dependent oxidoreductase, at 5,296,038 to 5,296,775
_RS23615
PFLU_RS23620: PFLU_RS23620 - MFS transporter, at 5,296,784 to 5,298,193
_RS23620
PFLU_RS23625: PFLU_RS23625 - hypothetical protein, at 5,298,323 to 5,298,808
_RS23625
Group
Condition
PFLU
_RS23605
PFLU
_RS23610
PFLU
_RS23615
PFLU
_RS23620
PFLU
_RS23625
carbon source
L-Arabinose (C)
+0.2
-1.0
+0.2
+0.1
-0.1
carbon source
L-Arabinose (C)
+0.1
-0.2
+0.0
-0.2
-0.1
carbon source
acetate (C)
-0.1
+0.1
+0.1
-0.2
-0.3
carbon source
D-Xylose (C)
+0.0
-0.1
-0.3
+0.1
+0.0
carbon source
L-Arabinose (C); with MOPS
-0.6
+0.2
+0.3
+0.1
-0.0
carbon source
succinate (C); with MOPS
+0.2
-0.4
-0.0
+0.0
+0.2
carbon source
D-Glucose (C); with MOPS
+0.2
-0.4
+0.1
+0.0
+0.1
carbon source
Trisodium citrate (C); with MOPS
+0.4
-0.1
-0.2
-0.2
+0.1
carbon source
L-Arabinose (C)
+0.1
-0.5
+0.2
+0.2
-0.0
carbon source
acetate (C)
+0.1
-0.3
+0.1
+0.4
-0.3
carbon source
Trisodium citrate (C); with MOPS
+0.2
-0.2
+0.1
+0.1
-0.1
carbon source
Trisodium citrate (C)
+0.1
+0.1
-0.1
+0.1
-0.1
carbon source
D-Glucose (C); with MOPS
+0.2
+0.1
+0.1
-0.2
-0.0
carbon source
D,L-Lactate (C)
+0.1
+0.2
+0.1
-0.1
-0.0
carbon source
NAG (C)
+0.2
-0.2
+0.0
+0.2
+0.1
carbon source
D-Glucose (C)
+0.1
+0.4
-0.1
+0.0
-0.0
carbon source
acetate (C)
+0.4
+0.2
+0.1
-0.1
-0.2
carbon source
D-Xylose (C)
-0.1
+0.3
+0.1
+0.1
+0.0
carbon source
succinate (C)
-0.0
+0.1
+0.3
+0.1
+0.0
carbon source
succinate (C)
+0.1
+0.3
+0.1
-0.0
+0.0
carbon source
acetate (C)
+0.1
+0.1
+0.1
+0.2
+0.1
carbon source
NAG (C); with MOPS
+0.3
+0.3
-0.0
+0.1
+0.0
carbon source
succinate (C); with MOPS
+0.1
+0.3
+0.1
+0.2
+0.0
carbon source
NAG (C); with MOPS
+0.2
+0.4
+0.1
-0.2
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.3
+0.3
-0.1
+0.1
+0.1
carbon source
D,L-Lactate (C)
+0.3
+0.2
-0.1
+0.2
+0.2
carbon source
succinate (C)
+0.3
+0.2
+0.1
+0.1
+0.2
carbon source
D-Glucose (C)
+0.1
+0.4
-0.1
+0.2
+0.2
carbon source
Trisodium citrate (C); with MOPS
+0.2
+0.5
+0.0
+0.2
+0.1
carbon source
Trisodium citrate (C)
+0.4
+0.3
+0.3
+0.1
+0.0
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