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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS23490 and PFLU_RS23495 are separated by 233 nucleotides
PFLU_RS23495 and PFLU_RS23500 are separated by 66 nucleotides
PFLU_RS23500 and PFLU_RS23505 overlap by 4 nucleotides
PFLU_RS23505 and PFLU_RS23510 are separated by 266 nucleotides
PFLU_RS23490: PFLU_RS23490 - transporter, at 5,274,595 to 5,275,617
_RS23490
PFLU_RS23495: PFLU_RS23495 - inorganic phosphate transporter, at 5,275,851 to 5,277,467
_RS23495
PFLU_RS23500: PFLU_RS23500 - biotin-dependent carboxyltransferase, at 5,277,534 to 5,278,508
_RS23500
PFLU_RS23505: PFLU_RS23505 - allophanate hydrolase subunit 1, at 5,278,505 to 5,279,383
_RS23505
PFLU_RS23510: PFLU_RS23510 - 5-oxoprolinase subunit PxpA, at 5,279,650 to 5,280,411
_RS23510
Group
Condition
PFLU
_RS23490
PFLU
_RS23495
PFLU
_RS23500
PFLU
_RS23505
PFLU
_RS23510
carbon source
succinate (C)
-0.2
-0.1
-0.1
-0.1
-0.1
carbon source
NAG (C); with MOPS
-0.5
-0.1
+0.1
-0.0
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.1
-0.0
-0.1
-0.2
-0.1
carbon source
D-Glucose (C)
-0.4
-0.1
+0.2
-0.0
+0.0
carbon source
succinate (C)
-0.2
-0.1
-0.2
+0.2
-0.0
carbon source
Trisodium citrate (C); with MOPS
-0.0
-0.1
-0.1
-0.1
-0.1
carbon source
D-Glucose (C)
-0.2
+0.0
-0.2
-0.0
+0.1
carbon source
NAG (C)
+0.0
-0.1
-0.1
+0.0
-0.0
carbon source
D-Glucose (C); with MOPS
+0.1
-0.1
+0.1
-0.3
+0.0
carbon source
succinate (C)
-0.0
-0.1
-0.1
+0.1
-0.1
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.2
+0.1
-0.2
+0.0
carbon source
NAG (C); with MOPS
-0.0
-0.1
+0.0
-0.2
+0.1
carbon source
acetate (C)
+0.3
-0.2
-0.3
-0.0
+0.1
carbon source
L-Arabinose (C); with MOPS
-0.1
+0.1
-0.1
+0.1
+0.0
carbon source
acetate (C)
-0.1
-0.3
+0.2
+0.1
+0.1
carbon source
succinate (C); with MOPS
+0.0
-0.1
+0.1
+0.0
-0.1
carbon source
L-Arabinose (C)
-0.1
+0.1
-0.3
-0.2
+0.5
carbon source
D,L-Lactate (C)
+0.1
-0.1
+0.1
-0.0
+0.0
carbon source
acetate (C)
+0.1
-0.1
+0.1
+0.0
-0.1
carbon source
acetate (C)
-0.2
-0.2
+0.4
-0.1
+0.1
carbon source
L-Arabinose (C)
-0.1
-0.0
-0.0
+0.1
+0.2
carbon source
Trisodium citrate (C)
-0.2
-0.0
+0.2
+0.1
+0.1
carbon source
D-Glucose (C); with MOPS
+0.0
+0.0
+0.2
-0.1
+0.1
carbon source
L-Arabinose (C)
-0.0
-0.1
+0.1
+0.0
+0.2
carbon source
succinate (C); with MOPS
+0.1
-0.0
+0.1
+0.2
-0.1
carbon source
D-Glucose (C); with MOPS
+0.2
-0.0
+0.1
-0.1
+0.1
carbon source
NAG (C); with MOPS
+0.1
-0.0
+0.1
+0.1
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.1
-0.0
+0.2
+0.0
+0.0
carbon source
D-Glucose (C)
+0.2
-0.0
+0.1
+0.1
+0.1
carbon source
D,L-Lactate (C)
+0.1
+0.1
+0.1
+0.1
+0.1
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