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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS23230 and PFLU_RS31780 are separated by 106 nucleotides
PFLU_RS31780 and PFLU_RS23235 are separated by 49 nucleotides
PFLU_RS23235 and PFLU_RS31785 are separated by 83 nucleotides
PFLU_RS31785 and PFLU_RS23240 overlap by 47 nucleotides
PFLU_RS23230: PFLU_RS23230 - hypothetical protein, at 5,217,234 to 5,217,413
_RS23230
PFLU_RS31780: PFLU_RS31780 - hypothetical protein, at 5,217,520 to 5,217,747
_RS31780
PFLU_RS23235: PFLU_RS23235 - Arc family DNA-binding protein, at 5,217,797 to 5,218,123
_RS23235
PFLU_RS31785: PFLU_RS31785 - hypothetical protein, at 5,218,207 to 5,218,386
_RS31785
PFLU_RS23240: PFLU_RS23240 - magnesium transporter, at 5,218,340 to 5,219,782
_RS23240
Group
Condition
PFLU
_RS23230
PFLU
_RS31780
PFLU
_RS23235
PFLU
_RS31785
PFLU
_RS23240
carbon source
acetate (C)
N.D.
-2.1
+0.1
-0.6
-0.5
carbon source
succinate (C); with MOPS
N.D.
+0.1
-2.3
-0.2
-0.2
carbon source
L-Arabinose (C)
N.D.
-0.0
-0.9
-0.1
-1.3
carbon source
NAG (C); with MOPS
N.D.
-0.8
+0.5
-0.1
-1.9
carbon source
L-Arabinose (C)
N.D.
+0.1
-0.5
-0.3
-1.3
carbon source
D,L-Lactate (C)
N.D.
+0.3
-1.8
-0.1
-0.2
carbon source
D-Glucose (C)
N.D.
-0.2
-0.9
+0.3
-0.9
carbon source
NAG (C)
N.D.
+0.3
+0.0
-0.3
-1.1
carbon source
Trisodium citrate (C)
N.D.
-0.2
-0.1
+0.6
-1.0
carbon source
L-Arabinose (C); with MOPS
N.D.
-0.1
+0.4
+0.2
-1.2
carbon source
succinate (C)
N.D.
+1.3
-1.1
-0.5
-0.3
carbon source
D-Glucose (C)
N.D.
+0.8
-0.6
-0.0
-0.7
carbon source
Trisodium citrate (C); with MOPS
N.D.
+0.5
-0.1
+0.0
-0.8
carbon source
NAG (C); with MOPS
N.D.
+0.7
+0.0
-0.1
-1.1
carbon source
Trisodium citrate (C)
N.D.
+0.0
+0.3
+0.3
-1.0
carbon source
D-Xylose (C)
N.D.
+0.2
+0.9
-0.9
-0.6
carbon source
acetate (C)
N.D.
+0.0
+0.4
+0.4
-1.2
carbon source
L-Arabinose (C); with MOPS
N.D.
+1.1
-0.4
-0.1
-0.8
carbon source
NAG (C); with MOPS
N.D.
+0.8
+1.2
-0.4
-1.8
carbon source
Trisodium citrate (C); with MOPS
N.D.
+0.4
+0.4
-0.1
-1.0
carbon source
D-Glucose (C)
N.D.
+0.4
+0.1
+0.0
-0.8
carbon source
D-Glucose (C); with MOPS
N.D.
+0.9
-0.1
-0.4
-0.7
carbon source
L-Arabinose (C)
N.D.
+1.0
+0.0
+0.0
-1.2
carbon source
Trisodium citrate (C)
N.D.
+0.6
-0.1
+0.1
-0.8
carbon source
Trisodium citrate (C); with MOPS
N.D.
-0.0
+0.8
-0.1
-0.8
carbon source
succinate (C); with MOPS
N.D.
+0.5
-0.0
+0.2
-0.7
carbon source
succinate (C)
N.D.
+0.4
+0.3
-0.0
-0.8
carbon source
L-Arabinose (C); with MOPS
N.D.
+1.2
-0.7
+0.3
-0.6
carbon source
D-Glucose (C); with MOPS
N.D.
+1.0
+0.8
-0.7
-0.7
carbon source
D,L-Lactate (C)
N.D.
+0.7
+0.4
-0.1
-0.1
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