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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS23175 and PFLU_RS23180 are separated by 3 nucleotides
PFLU_RS23180 and PFLU_RS23185 are separated by 309 nucleotides
PFLU_RS23185 and PFLU_RS23190 are separated by 43 nucleotides
PFLU_RS23190 and PFLU_RS23195 are separated by 82 nucleotides
PFLU_RS23175: PFLU_RS23175 - flagellar basal body rod protein FlgC, at 5,209,233 to 5,209,676
_RS23175
PFLU_RS23180: PFLU_RS23180 - flagellar basal body rod protein FlgB, at 5,209,680 to 5,210,087
_RS23180
PFLU_RS23185: PFLU_RS23185 - protein-glutamate O-methyltransferase CheR, at 5,210,397 to 5,211,224
_RS23185
PFLU_RS23190: PFLU_RS23190 - chemotaxis protein CheV, at 5,211,268 to 5,212,200
_RS23190
PFLU_RS23195: PFLU_RS23195 - flagellar basal body P-ring formation protein FlgA, at 5,212,283 to 5,213,047
_RS23195
Group
Condition
PFLU
_RS23175
PFLU
_RS23180
PFLU
_RS23185
PFLU
_RS23190
PFLU
_RS23195
carbon source
L-Arabinose (C)
-1.0
-1.1
-1.7
+0.2
-1.1
carbon source
L-Arabinose (C)
-1.2
-0.7
-1.1
+0.0
-1.0
carbon source
L-Arabinose (C)
-0.2
-0.8
-1.9
-0.1
-0.7
carbon source
L-Arabinose (C); with MOPS
+0.5
+0.1
-1.6
-0.3
+0.2
carbon source
succinate (C)
+0.5
+0.6
-1.9
-0.2
+0.5
carbon source
succinate (C); with MOPS
+0.7
+0.7
-2.3
-0.0
+0.7
carbon source
succinate (C); with MOPS
+0.7
+0.7
-1.8
-0.0
+0.5
carbon source
succinate (C); with MOPS
+0.7
+0.7
-1.7
-0.1
+0.7
carbon source
succinate (C)
+0.5
+0.4
-1.1
-0.1
+0.6
carbon source
D-Glucose (C)
+1.0
+0.8
-1.8
-0.1
+0.9
carbon source
D-Glucose (C); with MOPS
+0.9
+1.0
-1.6
-0.1
+0.8
carbon source
D-Glucose (C); with MOPS
+1.0
+1.1
-1.8
-0.2
+0.9
carbon source
Trisodium citrate (C)
+1.0
+1.1
-1.5
-0.2
+0.8
carbon source
acetate (C)
+0.6
+0.9
-0.6
-0.2
+0.5
carbon source
D-Glucose (C)
+0.8
+1.1
-1.5
-0.1
+1.0
carbon source
D-Glucose (C)
+1.0
+1.0
-1.6
-0.1
+1.0
carbon source
succinate (C)
+0.7
+0.5
-0.6
+0.0
+0.7
carbon source
Trisodium citrate (C)
+0.9
+0.9
-1.3
-0.1
+0.9
carbon source
D-Glucose (C); with MOPS
+0.8
+0.9
-0.8
-0.1
+0.8
carbon source
Trisodium citrate (C); with MOPS
+1.0
+0.9
-1.1
-0.0
+0.8
carbon source
Trisodium citrate (C)
+1.0
+1.1
-1.2
-0.0
+0.8
carbon source
Trisodium citrate (C); with MOPS
+0.9
+0.9
-0.9
-0.0
+1.1
carbon source
Trisodium citrate (C); with MOPS
+1.2
+0.9
-0.8
-0.3
+1.1
carbon source
D-Xylose (C)
+0.9
+1.0
-0.2
-0.1
+1.0
carbon source
D-Xylose (C)
+1.0
+1.0
-0.1
-0.1
+0.9
carbon source
NAG (C); with MOPS
+1.5
+1.7
-0.5
-0.1
+1.6
carbon source
NAG (C); with MOPS
+1.7
+1.6
-0.4
-0.1
+1.5
carbon source
NAG (C)
+1.5
+1.5
-0.2
+0.1
+1.5
carbon source
NAG (C); with MOPS
+1.7
+1.6
-0.5
-0.0
+1.6
carbon source
NAG (C)
+1.5
+1.5
-0.1
+0.0
+1.6
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