Fitness for 5 genes in Pseudomonas fluorescens SBW25

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 38 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS23110 and PFLU_RS23115 are separated by 139 nucleotidesPFLU_RS23115 and PFLU_RS23120 are separated by 338 nucleotidesPFLU_RS23120 and PFLU_RS23125 are separated by 120 nucleotidesPFLU_RS23125 and PFLU_RS23130 overlap by 4 nucleotides PFLU_RS23110: PFLU_RS23110 - XdhC family protein, at 5,192,576 to 5,193,562 _RS23110 PFLU_RS23115: PFLU_RS23115 - dicarboxylate/amino acid:cation symporter, at 5,193,702 to 5,195,033 _RS23115 PFLU_RS23120: PFLU_RS23120 - AraC family transcriptional regulator, at 5,195,372 to 5,196,370 _RS23120 PFLU_RS23125: PFLU_RS23125 - HAMP domain-containing protein, at 5,196,491 to 5,197,837 _RS23125 PFLU_RS23130: PFLU_RS23130 - response regulator transcription factor, at 5,197,834 to 5,198,511 _RS23130
Group Condition PFLU_RS23110 PFLU_RS23115 PFLU_RS23120 PFLU_RS23125 PFLU_RS23130
carbon source acetate (C) -0.1 -1.2 +0.4 -1.3 -3.7
carbon source succinate (C); with MOPS -0.0 -4.8 +0.1 -0.4 -0.7
carbon source succinate (C) -0.1 -4.7 -0.1 -0.2 -0.4
carbon source succinate (C) -0.0 -4.7 +0.1 -0.3 -0.6
carbon source succinate (C) +0.0 -4.8 +0.1 -0.3 -0.4
carbon source succinate (C); with MOPS +0.1 -4.5 +0.1 -0.4 -0.4
carbon source succinate (C); with MOPS +0.1 -4.2 +0.2 -0.4 -0.5
carbon source L-Arabinose (C) -0.2 -0.2 +0.1 -0.7 -2.2
carbon source NAG (C); with MOPS -0.1 -0.3 -0.1 -0.9 -1.8
carbon source L-Arabinose (C); with MOPS +0.1 -0.1 -0.1 -0.7 -2.0
carbon source NAG (C); with MOPS +0.0 -0.1 -0.0 -0.8 -1.8
carbon source L-Arabinose (C); with MOPS -0.2 -0.1 -0.1 -1.0 -1.4
carbon source acetate (C) +0.2 -1.2 +0.6 -1.1 -1.2
carbon source acetate (C) +0.1 -1.0 +0.5 -1.2 -1.1
carbon source NAG (C); with MOPS -0.3 +0.0 -0.1 -0.8 -1.4
carbon source L-Arabinose (C) +0.1 +0.1 +0.1 -0.8 -1.8
carbon source L-Arabinose (C) +0.4 -0.2 +0.0 -0.7 -1.8
carbon source D-Glucose (C) -0.2 -0.0 -0.0 -0.6 -1.2
carbon source Trisodium citrate (C) +0.1 -0.4 +0.2 -0.9 -1.0
carbon source L-Arabinose (C); with MOPS +0.4 -0.2 -0.2 -0.8 -1.0
carbon source D-Glucose (C); with MOPS -0.1 -0.1 -0.0 -0.4 -1.0
carbon source D-Glucose (C); with MOPS +0.1 -0.1 -0.2 -0.5 -0.8
carbon source Trisodium citrate (C); with MOPS -0.1 -0.4 -0.0 -0.4 -0.5
carbon source Trisodium citrate (C); with MOPS +0.1 -0.3 +0.1 -0.6 -0.7
carbon source Trisodium citrate (C) +0.2 -0.3 +0.2 -0.6 -0.8
carbon source Trisodium citrate (C) +0.0 -0.3 +0.2 -0.5 -0.7
carbon source D-Glucose (C) +0.2 -0.1 -0.1 -0.5 -0.9
carbon source Trisodium citrate (C); with MOPS +0.0 -0.3 +0.1 -0.4 -0.7
carbon source D-Glucose (C) +0.1 -0.0 -0.1 -0.5 -0.5
carbon source D-Glucose (C); with MOPS -0.0 -0.1 +0.0 -0.5 -0.3
remove
PFLU_RS23110
plot		 remove
PFLU_RS23115
plot		 remove
PFLU_RS23120		 remove
PFLU_RS23125
plot		 remove
PFLU_RS23130
plot