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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS22985 and PFLU_RS22990 are separated by 136 nucleotides
PFLU_RS22990 and PFLU_RS22995 overlap by 4 nucleotides
PFLU_RS22995 and PFLU_RS23000 are separated by 70 nucleotides
PFLU_RS23000 and PFLU_RS23005 are separated by 16 nucleotides
PFLU_RS22985: PFLU_RS22985 - allantoin permease, at 5,167,683 to 5,169,149
_RS22985
PFLU_RS22990: PFLU_RS22990 - ADP-ribosylglycohydrolase, at 5,169,286 to 5,170,287
_RS22990
PFLU_RS22995: PFLU_RS22995 - GntR family transcriptional regulator, at 5,170,284 to 5,170,997
_RS22995
PFLU_RS23000: PFLU_RS23000 - DUF1285 domain-containing protein, at 5,171,068 to 5,171,628
_RS23000
PFLU_RS23005: PFLU_RS23005 - DUF4823 domain-containing protein, at 5,171,645 to 5,172,250
_RS23005
Group
Condition
PFLU
_RS22985
PFLU
_RS22990
PFLU
_RS22995
PFLU
_RS23000
PFLU
_RS23005
carbon source
D-Glucose (C); with MOPS
+0.1
-0.7
+0.0
+0.1
+0.2
carbon source
D-Glucose (C); with MOPS
-0.1
-0.2
-0.3
+0.0
+0.3
carbon source
succinate (C); with MOPS
+0.1
-0.5
+0.1
+0.0
+0.3
carbon source
acetate (C)
+0.3
-0.2
-1.1
+0.3
+0.8
carbon source
succinate (C); with MOPS
-0.0
-0.4
+0.2
+0.2
+0.2
carbon source
acetate (C)
-0.0
-0.4
+0.2
+0.2
+0.1
carbon source
L-Arabinose (C)
-0.1
-0.2
+0.4
-0.2
+0.4
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.3
+0.0
+0.0
+0.4
carbon source
L-Arabinose (C)
-0.4
+0.5
+0.6
-0.4
+0.1
carbon source
D-Xylose (C)
+0.1
-0.3
+0.3
-0.0
+0.4
carbon source
L-Arabinose (C)
-0.2
+0.2
-0.4
+0.2
+0.8
carbon source
Trisodium citrate (C); with MOPS
-0.2
+0.2
+0.4
-0.1
+0.4
carbon source
NAG (C)
+0.1
+0.3
+0.3
-0.4
+0.4
carbon source
D,L-Lactate (C)
-0.2
+0.2
+0.3
+0.2
+0.3
carbon source
D-Glucose (C)
-0.0
+0.4
-0.2
+0.3
+0.4
carbon source
Trisodium citrate (C)
+0.1
+0.1
+0.1
+0.1
+0.6
carbon source
NAG (C); with MOPS
-0.1
+0.2
+0.1
+0.0
+0.8
carbon source
Trisodium citrate (C)
+0.0
-0.1
+0.2
+0.3
+0.7
carbon source
NAG (C); with MOPS
-0.1
+0.4
-0.1
+0.1
+0.7
carbon source
D-Glucose (C); with MOPS
+0.1
+0.5
+0.0
+0.3
+0.2
carbon source
acetate (C)
+0.2
-0.5
+0.5
-0.0
+0.9
carbon source
succinate (C); with MOPS
-0.0
+0.6
+0.1
+0.0
+0.5
carbon source
L-Arabinose (C); with MOPS
-0.1
+0.4
+0.5
+0.1
+0.4
carbon source
NAG (C)
+0.1
+0.2
+0.2
+0.1
+0.6
carbon source
L-Arabinose (C); with MOPS
-0.0
+0.3
+0.3
+0.1
+0.6
carbon source
Trisodium citrate (C); with MOPS
+0.1
+0.4
-0.0
+0.2
+0.5
carbon source
Trisodium citrate (C)
+0.1
+0.5
+0.3
+0.0
+0.5
carbon source
NAG (C); with MOPS
-0.0
+0.4
-0.1
+0.3
+0.9
carbon source
acetate (C)
+0.1
+0.1
+0.2
+0.3
+1.0
carbon source
L-Arabinose (C); with MOPS
+0.0
+0.9
-0.2
+0.4
+0.6
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