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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS22905 and PFLU_RS22910 are separated by 9 nucleotides
PFLU_RS22910 and PFLU_RS22915 are separated by 73 nucleotides
PFLU_RS22915 and PFLU_RS22920 are separated by 2 nucleotides
PFLU_RS22920 and PFLU_RS22925 are separated by 522 nucleotides
PFLU_RS22905: PFLU_RS22905 - DUF4398 domain-containing protein, at 5,152,480 to 5,152,842
_RS22905
PFLU_RS22910: PFLU_RS22910 - transporter substrate-binding domain-containing protein, at 5,152,852 to 5,153,667
_RS22910
PFLU_RS22915: PFLU_RS22915 - electron transfer flavoprotein subunit alpha, at 5,153,741 to 5,154,670
_RS22915
PFLU_RS22920: PFLU_RS22920 - electron transfer flavoprotein subunit beta/FixA family protein, at 5,154,673 to 5,155,422
_RS22920
PFLU_RS22925: PFLU_RS22925 - electron transfer flavoprotein-ubiquinone oxidoreductase, at 5,155,945 to 5,157,609
_RS22925
Group
Condition
PFLU
_RS22905
PFLU
_RS22910
PFLU
_RS22915
PFLU
_RS22920
PFLU
_RS22925
carbon source
L-Arabinose (C)
-1.8
+0.2
N.D.
N.D.
N.D.
carbon source
acetate (C)
-1.7
+0.2
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C)
-1.3
-0.2
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
-1.0
-0.1
N.D.
N.D.
N.D.
carbon source
D-Glucose (C); with MOPS
-1.0
-0.0
N.D.
N.D.
N.D.
carbon source
acetate (C)
-1.2
+0.1
N.D.
N.D.
N.D.
carbon source
NAG (C); with MOPS
-0.8
-0.2
N.D.
N.D.
N.D.
carbon source
D-Glucose (C); with MOPS
-0.9
-0.1
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
-1.0
+0.0
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C)
-1.1
+0.1
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C); with MOPS
-0.7
-0.2
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C); with MOPS
-0.8
+0.0
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-0.9
+0.1
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C); with MOPS
-1.0
+0.2
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C); with MOPS
-0.6
-0.1
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
-0.9
+0.2
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-0.8
+0.1
N.D.
N.D.
N.D.
carbon source
succinate (C)
-0.6
-0.0
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C); with MOPS
-0.8
+0.1
N.D.
N.D.
N.D.
carbon source
NAG (C); with MOPS
-0.6
+0.0
N.D.
N.D.
N.D.
carbon source
acetate (C)
-0.9
+0.4
N.D.
N.D.
N.D.
carbon source
NAG (C); with MOPS
-0.7
+0.2
N.D.
N.D.
N.D.
carbon source
D-Glucose (C); with MOPS
-0.4
+0.0
N.D.
N.D.
N.D.
carbon source
succinate (C); with MOPS
-0.3
-0.1
N.D.
N.D.
N.D.
carbon source
succinate (C); with MOPS
-0.4
+0.1
N.D.
N.D.
N.D.
carbon source
succinate (C)
-0.4
+0.1
N.D.
N.D.
N.D.
carbon source
succinate (C); with MOPS
-0.4
+0.1
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C); with MOPS
-0.3
+0.0
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-0.4
+0.3
N.D.
N.D.
N.D.
carbon source
succinate (C)
-0.3
+0.3
N.D.
N.D.
N.D.
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