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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS22365 and PFLU_RS22370 are separated by 111 nucleotides
PFLU_RS22370 and PFLU_RS22375 are separated by 22 nucleotides
PFLU_RS22375 and PFLU_RS22380 overlap by 8 nucleotides
PFLU_RS22380 and PFLU_RS22385 are separated by 101 nucleotides
PFLU_RS22365: PFLU_RS22365 - membrane protein, at 5,029,590 to 5,030,129
_RS22365
PFLU_RS22370: PFLU_RS22370 - cadmium-translocating P-type ATPase, at 5,030,241 to 5,032,685
_RS22370
PFLU_RS22375: PFLU_RS22375 - cbb3-type cytochrome oxidase assembly protein CcoS, at 5,032,708 to 5,032,926
_RS22375
PFLU_RS22380: PFLU_RS22380 - sulfite exporter TauE/SafE family protein, at 5,032,919 to 5,033,602
_RS22380
PFLU_RS22385: PFLU_RS22385 - oxygen-independent coproporphyrinogen III oxidase, at 5,033,704 to 5,035,086
_RS22385
Group
Condition
PFLU
_RS22365
PFLU
_RS22370
PFLU
_RS22375
PFLU
_RS22380
PFLU
_RS22385
carbon source
NAG (C); with MOPS
-0.4
-0.8
-0.5
-2.1
+0.9
carbon source
NAG (C); with MOPS
-0.1
-1.0
-1.1
-0.5
+1.2
carbon source
succinate (C)
-0.5
-0.5
-0.3
-0.4
+0.3
carbon source
L-Arabinose (C); with MOPS
-0.0
-0.7
-0.7
-0.8
+0.8
carbon source
succinate (C); with MOPS
-0.5
-0.6
-0.0
-0.5
+0.5
carbon source
succinate (C); with MOPS
-0.2
-0.5
-0.1
-0.4
+0.4
carbon source
L-Arabinose (C); with MOPS
-0.3
-0.6
-0.0
-0.7
+0.8
carbon source
acetate (C)
-1.1
-1.0
-0.2
-0.8
+2.3
carbon source
NAG (C); with MOPS
+0.1
-0.3
-0.7
-0.5
+1.0
carbon source
succinate (C); with MOPS
-0.3
-0.2
+0.1
-0.2
+0.2
carbon source
Trisodium citrate (C); with MOPS
-0.4
-0.5
+0.0
-0.3
+0.9
carbon source
D-Glucose (C)
-0.1
-0.4
-0.4
-0.1
+0.8
carbon source
acetate (C)
-0.9
-0.3
-0.9
-0.4
+2.3
carbon source
D-Glucose (C); with MOPS
-0.1
-0.1
-0.4
-0.2
+0.6
carbon source
succinate (C)
+0.0
-0.4
-0.2
-0.0
+0.4
carbon source
D-Glucose (C)
-0.2
-0.2
-0.6
-0.0
+0.8
carbon source
D-Glucose (C); with MOPS
+0.3
-0.8
-0.1
-0.0
+0.6
carbon source
D-Glucose (C)
-0.3
-0.1
-0.6
+0.1
+0.9
carbon source
L-Arabinose (C); with MOPS
-0.5
-0.2
+0.2
-0.4
+1.0
carbon source
Trisodium citrate (C); with MOPS
-0.0
-0.1
-0.3
-0.3
+0.8
carbon source
acetate (C)
-0.8
-0.6
-0.2
-0.4
+2.1
carbon source
D-Glucose (C); with MOPS
-0.2
-0.2
-0.3
+0.4
+0.6
carbon source
Trisodium citrate (C)
-0.1
-0.0
+0.1
-0.0
+0.7
carbon source
Trisodium citrate (C); with MOPS
+0.2
-0.4
-0.2
+0.0
+1.0
carbon source
Trisodium citrate (C)
+0.0
-0.1
-0.1
-0.2
+1.0
carbon source
Trisodium citrate (C)
+0.0
-0.4
+0.2
+0.4
+0.9
carbon source
L-Arabinose (C)
+0.0
-0.2
+0.0
+0.3
+1.2
carbon source
acetate (C)
+0.3
+0.4
+0.3
+0.5
-0.0
carbon source
L-Arabinose (C)
-0.1
+0.3
+0.5
+0.3
+0.8
carbon source
L-Arabinose (C)
+0.3
-0.1
+0.1
+0.5
+1.3
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