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Protein
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Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS21865 and PFLU_RS21870 are separated by 257 nucleotides
PFLU_RS21870 and PFLU_RS21875 are separated by 96 nucleotides
PFLU_RS21875 and PFLU_RS21880 overlap by 1 nucleotides
PFLU_RS21880 and PFLU_RS21885 are separated by 126 nucleotides
PFLU_RS21865: PFLU_RS21865 - sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR, at 4,923,218 to 4,924,780
_RS21865
PFLU_RS21870: PFLU_RS21870 - phenylalanine 4-monooxygenase, at 4,925,038 to 4,925,829
_RS21870
PFLU_RS21875: PFLU_RS21875 - 4a-hydroxytetrahydrobiopterin dehydratase, at 4,925,926 to 4,926,282
_RS21875
PFLU_RS21880: PFLU_RS21880 - aspartate/tyrosine/aromatic aminotransferase, at 4,926,282 to 4,927,475
_RS21880
PFLU_RS21885: PFLU_RS21885 - UDP-2,3-diacylglucosamine diphosphatase, at 4,927,602 to 4,928,411
_RS21885
Group
Condition
PFLU
_RS21865
PFLU
_RS21870
PFLU
_RS21875
PFLU
_RS21880
PFLU
_RS21885
carbon source
D-Glucose (C); with MOPS
+0.0
-0.2
N.D.
-0.1
-0.2
carbon source
acetate (C)
-0.2
-0.1
N.D.
+0.2
-0.3
carbon source
D-Glucose (C); with MOPS
-0.1
+0.0
N.D.
-0.2
-0.1
carbon source
D-Glucose (C)
+0.1
+0.1
N.D.
-0.3
-0.2
carbon source
L-Arabinose (C); with MOPS
-0.2
+0.2
N.D.
-0.1
-0.2
carbon source
acetate (C)
-0.1
-0.2
N.D.
-0.0
-0.1
carbon source
L-Arabinose (C)
-0.2
-0.1
N.D.
+0.1
-0.0
carbon source
L-Arabinose (C)
-0.2
-0.1
N.D.
+0.0
-0.0
carbon source
Trisodium citrate (C); with MOPS
-0.0
+0.1
N.D.
-0.2
-0.0
carbon source
succinate (C)
+0.1
+0.0
N.D.
-0.2
-0.1
carbon source
D,L-Lactate (C)
-0.1
-0.1
N.D.
-0.0
+0.0
carbon source
acetate (C)
-0.1
-0.2
N.D.
+0.2
+0.0
carbon source
succinate (C); with MOPS
+0.1
+0.2
N.D.
-0.0
-0.3
carbon source
D-Glucose (C)
+0.1
+0.0
N.D.
+0.1
-0.3
carbon source
Trisodium citrate (C); with MOPS
+0.1
-0.1
N.D.
+0.1
-0.1
carbon source
D-Xylose (C)
-0.0
-0.1
N.D.
+0.1
-0.1
carbon source
succinate (C)
+0.0
+0.2
N.D.
-0.2
-0.0
carbon source
D-Glucose (C)
-0.1
+0.1
N.D.
+0.1
-0.1
carbon source
NAG (C); with MOPS
+0.2
+0.1
N.D.
-0.2
-0.0
carbon source
Trisodium citrate (C)
+0.0
+0.1
N.D.
+0.1
-0.1
carbon source
succinate (C)
-0.1
+0.2
N.D.
+0.0
+0.0
carbon source
NAG (C)
+0.1
-0.1
N.D.
-0.0
+0.1
carbon source
L-Arabinose (C)
-0.0
+0.1
N.D.
+0.3
-0.1
carbon source
succinate (C); with MOPS
-0.1
+0.1
N.D.
+0.2
+0.0
carbon source
L-Arabinose (C); with MOPS
+0.2
+0.0
N.D.
+0.2
-0.1
carbon source
NAG (C); with MOPS
+0.1
-0.0
N.D.
+0.3
+0.0
carbon source
Trisodium citrate (C)
+0.1
+0.3
N.D.
-0.0
+0.0
carbon source
Trisodium citrate (C)
+0.1
+0.2
N.D.
+0.2
-0.1
carbon source
NAG (C); with MOPS
+0.1
+0.3
N.D.
+0.3
-0.1
carbon source
acetate (C)
+0.2
+0.1
N.D.
+0.3
-0.1
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