Private Fitness
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS21510 and PFLU_RS21515 are separated by 778 nucleotides
PFLU_RS21515 and PFLU_RS21520 are separated by 51 nucleotides
PFLU_RS21520 and PFLU_RS21525 are separated by 301 nucleotides
PFLU_RS21525 and PFLU_RS31750 are separated by 15 nucleotides
PFLU_RS21510: PFLU_RS21510 - hypothetical protein, at 4,838,038 to 4,840,149
_RS21510
PFLU_RS21515: PFLU_RS21515 - non-ribosomal peptide synthetase, at 4,840,928 to 4,853,818
_RS21515
PFLU_RS21520: PFLU_RS21520 - thioesterase, at 4,853,870 to 4,854,622
_RS21520
PFLU_RS21525: PFLU_RS21525 - RNA polymerase factor sigma-70, at 4,854,924 to 4,855,475
_RS21525
PFLU_RS31750: PFLU_RS31750 - hypothetical protein, at 4,855,491 to 4,855,703
_RS31750
Group
Condition
PFLU
_RS21510
PFLU
_RS21515
PFLU
_RS21520
PFLU
_RS21525
PFLU
_RS31750
carbon source
D-Glucose (C); with MOPS
+0.0
+0.0
-1.2
-0.3
+0.1
carbon source
D-Xylose (C)
-0.1
-0.0
-0.6
-0.1
-0.4
carbon source
Trisodium citrate (C)
-0.1
+0.0
-1.1
+0.0
-0.2
carbon source
acetate (C)
+0.1
-0.1
-0.4
-0.1
-0.6
carbon source
NAG (C); with MOPS
-0.0
-0.0
-0.3
-0.4
-0.2
carbon source
NAG (C); with MOPS
+0.1
+0.0
-0.7
-0.3
-0.0
carbon source
NAG (C)
-0.0
-0.1
-0.6
-0.1
-0.1
carbon source
acetate (C)
+0.0
+0.0
-0.6
-0.2
-0.0
carbon source
acetate (C)
+0.0
-0.0
-1.0
-0.1
+0.3
carbon source
Trisodium citrate (C)
+0.1
+0.0
-0.4
-0.1
-0.3
carbon source
L-Arabinose (C)
+0.1
+0.1
-0.6
+0.3
-0.4
carbon source
D-Xylose (C)
-0.1
-0.1
-0.4
+0.1
-0.1
carbon source
Trisodium citrate (C); with MOPS
-0.0
+0.0
-0.1
-0.1
-0.3
carbon source
succinate (C)
+0.0
-0.0
-0.3
+0.0
-0.1
carbon source
Trisodium citrate (C); with MOPS
+0.0
+0.1
-0.3
+0.1
-0.1
carbon source
NAG (C); with MOPS
+0.1
-0.0
+0.1
+0.1
-0.3
carbon source
D,L-Lactate (C)
-0.0
+0.0
-0.2
+0.2
+0.0
carbon source
L-Arabinose (C); with MOPS
+0.2
+0.0
-0.1
-0.0
+0.1
carbon source
succinate (C); with MOPS
-0.1
+0.0
+0.3
-0.1
+0.1
carbon source
succinate (C); with MOPS
+0.1
+0.1
-0.1
-0.1
+0.2
carbon source
Trisodium citrate (C)
-0.0
+0.1
+0.3
-0.0
-0.0
carbon source
D,L-Lactate (C)
-0.1
-0.0
+0.2
+0.2
+0.1
carbon source
L-Arabinose (C)
+0.1
+0.0
-0.4
+0.5
+0.0
carbon source
succinate (C)
+0.1
-0.0
+0.0
+0.4
-0.1
carbon source
D-Glucose (C)
+0.0
-0.0
+0.4
-0.0
+0.1
carbon source
L-Arabinose (C); with MOPS
+0.1
+0.1
-0.2
+0.2
+0.4
carbon source
D-Glucose (C); with MOPS
+0.0
+0.0
+0.3
+0.1
+0.2
carbon source
D-Glucose (C)
+0.1
+0.1
+0.4
-0.0
+0.1
carbon source
L-Arabinose (C)
+0.2
+0.1
-0.2
+0.2
+0.3
carbon source
succinate (C)
-0.0
-0.0
+0.6
+0.3
-0.2
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