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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS21210 and PFLU_RS21215 are separated by 59 nucleotides
PFLU_RS21215 and PFLU_RS21220 are separated by 2 nucleotides
PFLU_RS21220 and PFLU_RS21225 are separated by 129 nucleotides
PFLU_RS21225 and PFLU_RS31025 are separated by 330 nucleotides
PFLU_RS21210: PFLU_RS21210 - osmoprotectant NAGGN system M42 family peptidase, at 4,773,786 to 4,774,970
_RS21210
PFLU_RS21215: PFLU_RS21215 - YheU family protein, at 4,775,030 to 4,775,257
_RS21215
PFLU_RS21220: PFLU_RS21220 - carbon storage regulator CsrA, at 4,775,260 to 4,775,463
_RS21220
PFLU_RS21225: PFLU_RS21225 - SDR family oxidoreductase, at 4,775,593 to 4,776,408
_RS21225
PFLU_RS31025: PFLU_RS31025 - DUF3309 domain-containing protein, at 4,776,739 to 4,776,891
_RS31025
Group
Condition
PFLU
_RS21210
PFLU
_RS21215
PFLU
_RS21220
PFLU
_RS21225
PFLU
_RS31025
carbon source
acetate (C)
-0.2
N.D.
-0.4
-0.0
-0.9
carbon source
Trisodium citrate (C); with MOPS
+0.0
N.D.
-0.0
-0.1
-1.4
carbon source
D-Glucose (C); with MOPS
+0.1
N.D.
-0.2
-0.1
-1.0
carbon source
acetate (C)
+0.0
N.D.
-0.1
-0.3
-0.8
carbon source
L-Arabinose (C); with MOPS
+0.1
N.D.
-0.1
+0.0
-0.9
carbon source
Trisodium citrate (C)
-0.4
N.D.
-0.1
-0.0
-0.2
carbon source
L-Arabinose (C); with MOPS
-0.0
N.D.
-0.2
+0.1
-0.5
carbon source
D,L-Lactate (C)
-0.2
N.D.
-0.4
-0.0
-0.1
carbon source
D-Glucose (C)
+0.0
N.D.
-0.2
-0.2
-0.2
carbon source
Trisodium citrate (C); with MOPS
+0.0
N.D.
-0.1
-0.1
-0.4
carbon source
succinate (C)
+0.0
N.D.
-0.1
+0.0
-0.5
carbon source
D-Glucose (C); with MOPS
+0.0
N.D.
+0.3
+0.1
-0.8
carbon source
D,L-Lactate (C)
-0.0
N.D.
-0.1
-0.2
-0.2
carbon source
succinate (C); with MOPS
-0.0
N.D.
-0.2
-0.2
+0.0
carbon source
D-Glucose (C)
-0.0
N.D.
-0.3
-0.2
+0.1
carbon source
Trisodium citrate (C)
-0.0
N.D.
-0.2
-0.2
+0.0
carbon source
L-Arabinose (C)
-0.3
N.D.
+0.2
-0.0
-0.2
carbon source
acetate (C)
+0.0
N.D.
+0.3
-0.6
+0.1
carbon source
NAG (C); with MOPS
-0.1
N.D.
-0.2
-0.0
+0.3
carbon source
L-Arabinose (C); with MOPS
-0.1
N.D.
+0.2
-0.1
-0.0
carbon source
acetate (C)
-0.1
N.D.
+0.1
+0.1
-0.2
carbon source
D-Glucose (C)
+0.1
N.D.
+0.1
-0.0
-0.3
carbon source
succinate (C)
+0.0
N.D.
-0.2
+0.1
+0.0
carbon source
succinate (C)
+0.0
N.D.
-0.3
+0.0
+0.3
carbon source
acetate (C)
-0.2
N.D.
+0.2
+0.0
+0.1
carbon source
succinate (C); with MOPS
-0.1
N.D.
-0.4
+0.0
+0.5
carbon source
L-Arabinose (C)
+0.1
N.D.
+0.1
+0.1
-0.2
carbon source
NAG (C); with MOPS
-0.1
N.D.
+0.2
-0.1
+0.1
carbon source
succinate (C); with MOPS
+0.1
N.D.
-0.1
+0.0
+0.3
carbon source
L-Arabinose (C)
+0.4
N.D.
+0.4
-0.0
+0.8
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