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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS21175 and PFLU_RS21180 are separated by 265 nucleotides
PFLU_RS21180 and PFLU_RS21185 are separated by 319 nucleotides
PFLU_RS21185 and PFLU_RS21190 are separated by 157 nucleotides
PFLU_RS21190 and PFLU_RS21195 are separated by 5 nucleotides
PFLU_RS21175: PFLU_RS21175 - DMT family transporter, at 4,758,820 to 4,759,776
_RS21175
PFLU_RS21180: PFLU_RS21180 - thiolase family protein, at 4,760,042 to 4,761,226
_RS21180
PFLU_RS21185: PFLU_RS21185 - polyphosphate:AMP phosphotransferase, at 4,761,546 to 4,763,060
_RS21185
PFLU_RS21190: PFLU_RS21190 - bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC, at 4,763,218 to 4,765,197
_RS21190
PFLU_RS21195: PFLU_RS21195 - hypothetical protein, at 4,765,203 to 4,770,020
_RS21195
Group
Condition
PFLU
_RS21175
PFLU
_RS21180
PFLU
_RS21185
PFLU
_RS21190
PFLU
_RS21195
carbon source
Trisodium citrate (C); with MOPS
-0.1
-0.0
-0.3
+0.1
-0.2
carbon source
acetate (C)
-0.0
-0.0
-0.3
-0.2
-0.1
carbon source
succinate (C); with MOPS
-0.1
-0.0
-0.2
-0.1
-0.1
carbon source
succinate (C); with MOPS
-0.1
+0.2
-0.3
-0.1
-0.2
carbon source
D-Glucose (C); with MOPS
-0.1
-0.1
-0.2
+0.1
-0.1
carbon source
D-Glucose (C)
-0.2
+0.2
-0.3
+0.1
-0.2
carbon source
D-Glucose (C)
-0.2
+0.2
-0.2
-0.1
-0.1
carbon source
L-Arabinose (C); with MOPS
-0.1
-0.2
-0.2
+0.2
-0.1
carbon source
Trisodium citrate (C); with MOPS
-0.1
-0.0
+0.1
-0.2
-0.1
carbon source
acetate (C)
-0.2
+0.0
-0.6
+0.5
-0.0
carbon source
NAG (C); with MOPS
-0.0
-0.1
-0.2
+0.1
+0.0
carbon source
NAG (C); with MOPS
-0.2
-0.2
+0.1
+0.1
-0.2
carbon source
Trisodium citrate (C)
-0.0
+0.1
-0.2
-0.0
-0.1
carbon source
acetate (C)
+0.1
-0.1
-0.1
-0.1
-0.0
carbon source
D,L-Lactate (C)
-0.1
+0.0
+0.1
-0.2
+0.0
carbon source
L-Arabinose (C); with MOPS
-0.1
-0.1
-0.1
+0.2
-0.1
carbon source
D-Glucose (C); with MOPS
-0.0
+0.3
-0.1
-0.2
-0.1
carbon source
succinate (C)
-0.2
+0.0
+0.1
+0.1
-0.1
carbon source
succinate (C); with MOPS
-0.0
+0.1
+0.1
-0.2
-0.0
carbon source
Trisodium citrate (C)
-0.1
+0.2
+0.1
+0.0
-0.1
carbon source
D-Glucose (C); with MOPS
-0.1
+0.0
+0.2
-0.0
-0.2
carbon source
L-Arabinose (C); with MOPS
-0.1
+0.2
-0.2
+0.2
-0.0
carbon source
acetate (C)
+0.1
+0.2
-0.1
-0.1
+0.0
carbon source
D-Xylose (C)
+0.1
+0.0
+0.1
-0.1
-0.0
carbon source
L-Arabinose (C)
-0.2
+0.3
+0.2
+0.0
-0.1
carbon source
NAG (C); with MOPS
+0.1
+0.2
+0.1
-0.1
+0.0
carbon source
succinate (C)
+0.2
+0.2
+0.1
-0.0
-0.0
carbon source
L-Arabinose (C)
+0.1
+0.1
+0.0
+0.6
-0.1
carbon source
L-Arabinose (C)
-0.1
-0.1
+0.3
+0.4
+0.1
carbon source
acetate (C)
+0.1
-0.0
+0.2
+0.3
+0.1
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