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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS21135 and PFLU_RS21140 are separated by 46 nucleotides
PFLU_RS21140 and PFLU_RS21145 are separated by 71 nucleotides
PFLU_RS21145 and PFLU_RS21150 overlap by 8 nucleotides
PFLU_RS21150 and PFLU_RS21155 are separated by 3 nucleotides
PFLU_RS21135: PFLU_RS21135 - TenA family transcriptional regulator, at 4,749,480 to 4,750,280
_RS21135
PFLU_RS21140: PFLU_RS21140 - EAL domain-containing protein, at 4,750,327 to 4,752,789
_RS21140
PFLU_RS21145: PFLU_RS21145 - ABC transporter ATP-binding protein, at 4,752,861 to 4,754,663
_RS21145
PFLU_RS21150: PFLU_RS21150 - DsbA family protein, at 4,754,656 to 4,755,291
_RS21150
PFLU_RS21155: PFLU_RS21155 - rhodanese-related sulfurtransferase, at 4,755,295 to 4,756,236
_RS21155
Group
Condition
PFLU
_RS21135
PFLU
_RS21140
PFLU
_RS21145
PFLU
_RS21150
PFLU
_RS21155
carbon source
NAG (C)
-0.1
-0.7
-0.1
-0.5
-0.2
carbon source
NAG (C); with MOPS
-0.2
-1.1
-0.1
-0.0
-0.2
carbon source
NAG (C); with MOPS
+0.0
-0.9
+0.0
-0.1
-0.2
carbon source
D-Xylose (C)
-0.0
-0.7
-0.1
-0.3
+0.0
carbon source
NAG (C)
-0.1
-0.9
-0.1
+0.0
+0.0
carbon source
succinate (C); with MOPS
-0.1
-0.1
+0.1
-0.4
-0.3
carbon source
NAG (C); with MOPS
-0.0
-1.0
+0.0
+0.4
-0.1
carbon source
L-Arabinose (C); with MOPS
-0.0
-0.2
+0.1
+0.3
-0.6
carbon source
D,L-Lactate (C)
-0.1
-0.2
+0.2
-0.3
-0.1
carbon source
succinate (C)
-0.1
-0.2
+0.1
+0.0
-0.2
carbon source
D-Glucose (C); with MOPS
-0.1
-0.2
+0.1
+0.2
-0.4
carbon source
Trisodium citrate (C)
-0.1
-0.1
+0.1
+0.1
-0.3
carbon source
succinate (C); with MOPS
+0.1
-0.1
+0.1
-0.3
-0.1
carbon source
D-Xylose (C)
+0.2
-0.5
-0.1
+0.1
+0.0
carbon source
acetate (C)
+0.1
-0.1
-0.2
+0.2
-0.2
carbon source
succinate (C); with MOPS
-0.0
-0.2
-0.0
+0.3
-0.2
carbon source
acetate (C)
-0.0
+0.1
-0.2
+0.4
-0.5
carbon source
D-Glucose (C)
+0.2
-0.2
+0.0
+0.2
-0.3
carbon source
L-Arabinose (C)
-0.2
+0.0
-0.1
-0.0
+0.2
carbon source
Trisodium citrate (C); with MOPS
-0.0
-0.1
+0.0
+0.3
-0.3
carbon source
D-Glucose (C); with MOPS
+0.0
-0.2
-0.1
+0.4
-0.1
carbon source
Trisodium citrate (C); with MOPS
-0.0
-0.1
+0.0
+0.2
-0.1
carbon source
L-Arabinose (C)
-0.1
-0.1
-0.2
+0.5
-0.0
carbon source
D-Glucose (C)
-0.0
-0.2
+0.0
+0.3
+0.0
carbon source
L-Arabinose (C); with MOPS
+0.0
+0.0
-0.1
+0.4
-0.2
carbon source
acetate (C)
+0.0
-0.0
+0.2
-0.2
+0.2
carbon source
succinate (C)
+0.1
-0.1
-0.1
+0.3
+0.1
carbon source
D-Glucose (C)
+0.1
-0.0
+0.2
+0.3
-0.2
carbon source
acetate (C)
+0.2
+0.0
-0.3
+0.7
-0.2
carbon source
L-Arabinose (C); with MOPS
+0.2
-0.2
+0.1
+0.6
-0.2
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