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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS20605 and PFLU_RS20610 are separated by 563 nucleotides
PFLU_RS20610 and PFLU_RS20615 are separated by 55 nucleotides
PFLU_RS20615 and PFLU_RS20620 are separated by 40 nucleotides
PFLU_RS20620 and PFLU_RS20625 are separated by 14 nucleotides
PFLU_RS20605: PFLU_RS20605 - hypothetical protein, at 4,643,485 to 4,645,062
_RS20605
PFLU_RS20610: PFLU_RS20610 - tRNA-dihydrouridine synthase family protein, at 4,645,626 to 4,646,603
_RS20610
PFLU_RS20615: PFLU_RS20615 - acyl-CoA thioesterase, at 4,646,659 to 4,647,093
_RS20615
PFLU_RS20620: PFLU_RS20620 - alpha/beta fold hydrolase, at 4,647,134 to 4,647,967
_RS20620
PFLU_RS20625: PFLU_RS20625 - TetR/AcrR family transcriptional regulator, at 4,647,982 to 4,648,521
_RS20625
Group
Condition
PFLU
_RS20605
PFLU
_RS20610
PFLU
_RS20615
PFLU
_RS20620
PFLU
_RS20625
carbon source
acetate (C)
+0.3
+0.2
-0.4
+0.2
-5.5
carbon source
acetate (C)
+0.2
+0.2
-0.4
+0.1
-5.4
carbon source
acetate (C)
-0.5
+0.3
-0.3
+0.1
-4.6
carbon source
L-Arabinose (C); with MOPS
+0.1
+0.1
-0.4
-0.3
-3.2
carbon source
NAG (C); with MOPS
+0.3
+0.1
-0.1
-0.3
-3.2
carbon source
L-Arabinose (C); with MOPS
+0.1
+0.1
-0.2
-0.2
-2.8
carbon source
NAG (C); with MOPS
+0.2
+0.2
-0.0
+0.1
-3.3
carbon source
NAG (C); with MOPS
+0.0
+0.2
-0.4
+0.2
-2.6
carbon source
Trisodium citrate (C)
+0.2
+0.2
+0.1
+0.1
-2.6
carbon source
L-Arabinose (C)
+0.4
-0.0
-0.3
+0.1
-2.0
carbon source
D-Glucose (C); with MOPS
-0.1
+0.1
+0.2
-0.2
-1.7
carbon source
Trisodium citrate (C); with MOPS
+0.1
+0.2
-0.1
+0.1
-1.9
carbon source
D-Glucose (C); with MOPS
+0.3
+0.2
+0.1
+0.0
-1.9
carbon source
D-Glucose (C); with MOPS
+0.0
+0.1
+0.1
-0.3
-1.2
carbon source
D-Glucose (C)
+0.1
+0.2
+0.3
+0.0
-1.8
carbon source
NAG (C)
+0.0
-0.1
-0.1
-0.2
-0.6
carbon source
succinate (C)
-0.1
+0.1
-0.2
-0.4
-0.4
carbon source
Trisodium citrate (C); with MOPS
-0.0
-0.1
+0.0
+0.2
-1.0
carbon source
succinate (C)
+0.0
+0.1
+0.4
-0.0
-1.3
carbon source
succinate (C); with MOPS
+0.1
+0.1
+0.1
+0.1
-0.9
carbon source
succinate (C)
+0.3
+0.1
-0.4
+0.2
-0.9
carbon source
D-Glucose (C)
+0.1
+0.1
+0.4
+0.1
-1.3
carbon source
succinate (C); with MOPS
+0.2
+0.2
-0.1
+0.1
-0.9
carbon source
L-Arabinose (C)
+0.2
+0.0
+0.2
-0.1
-0.8
carbon source
Trisodium citrate (C); with MOPS
-0.0
+0.2
-0.1
+0.1
-0.7
carbon source
Trisodium citrate (C)
+0.1
+0.2
+0.2
-0.1
-0.9
carbon source
Trisodium citrate (C)
+0.1
+0.0
+0.3
+0.1
-0.9
carbon source
L-Arabinose (C); with MOPS
+0.3
+0.1
-0.3
+0.2
-0.4
carbon source
L-Arabinose (C)
+0.4
+0.1
-0.5
+0.3
-0.4
carbon source
D-Glucose (C)
+0.0
+0.2
-0.1
+0.3
-0.5
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