Private Fitness
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS20580 and PFLU_RS20585 are separated by 140 nucleotides
PFLU_RS20585 and PFLU_RS20590 are separated by 65 nucleotides
PFLU_RS20590 and PFLU_RS20595 overlap by 4 nucleotides
PFLU_RS20595 and PFLU_RS31715 are separated by 69 nucleotides
PFLU_RS20580: PFLU_RS20580 - 3-isopropylmalate dehydratase large subunit, at 4,634,643 to 4,636,061
_RS20580
PFLU_RS20585: PFLU_RS20585 - LysR family transcriptional regulator, at 4,636,202 to 4,637,092
_RS20585
PFLU_RS20590: PFLU_RS20590 - EAL domain-containing protein, at 4,637,158 to 4,640,454
_RS20590
PFLU_RS20595: PFLU_RS20595 - hypothetical protein, at 4,640,451 to 4,642,385
_RS20595
PFLU_RS31715: PFLU_RS31715 - hypothetical protein, at 4,642,455 to 4,642,946
_RS31715
Group
Condition
PFLU
_RS20580
PFLU
_RS20585
PFLU
_RS20590
PFLU
_RS20595
PFLU
_RS31715
carbon source
D,L-Lactate (C)
-5.8
+0.1
+0.1
-0.0
-0.3
carbon source
NAG (C); with MOPS
-5.1
-0.1
-0.2
+0.1
-0.3
carbon source
D-Xylose (C)
-5.5
-0.2
-0.1
+0.1
+0.3
carbon source
NAG (C); with MOPS
-5.5
-0.0
+0.1
+0.1
-0.0
carbon source
NAG (C)
-5.5
+0.1
+0.1
-0.0
-0.1
carbon source
NAG (C)
-5.5
+0.1
+0.0
+0.0
+0.1
carbon source
acetate (C)
-4.9
-0.3
-0.2
-0.1
+0.4
carbon source
L-Arabinose (C)
-5.0
-0.3
-0.1
-0.0
+0.3
carbon source
L-Arabinose (C)
-4.1
-0.6
-0.2
-0.1
-0.2
carbon source
D,L-Lactate (C)
-5.3
+0.2
+0.2
-0.0
-0.1
carbon source
L-Arabinose (C); with MOPS
-4.7
-0.1
-0.0
+0.1
-0.1
carbon source
acetate (C)
-4.7
+0.1
+0.1
+0.0
-0.3
carbon source
Trisodium citrate (C); with MOPS
-4.0
-0.0
+0.0
-0.0
-0.6
carbon source
acetate (C)
-4.9
-0.1
+0.1
+0.1
+0.1
carbon source
acetate (C)
-4.8
-0.0
+0.0
-0.1
+0.2
carbon source
D-Xylose (C)
-4.5
-0.1
-0.1
+0.0
+0.1
carbon source
L-Arabinose (C); with MOPS
-4.8
-0.0
+0.0
+0.0
+0.3
carbon source
L-Arabinose (C); with MOPS
-4.3
-0.1
-0.2
-0.0
+0.1
carbon source
L-Arabinose (C)
-4.3
-0.5
-0.0
-0.0
+0.4
carbon source
succinate (C); with MOPS
-4.2
-0.1
+0.1
-0.1
-0.1
carbon source
NAG (C); with MOPS
-4.4
-0.1
+0.2
+0.1
-0.1
carbon source
Trisodium citrate (C); with MOPS
-4.3
-0.0
-0.0
+0.1
+0.2
carbon source
Trisodium citrate (C); with MOPS
-3.9
+0.1
-0.1
+0.1
-0.2
carbon source
acetate (C)
-4.1
+0.0
-0.1
-0.0
+0.2
carbon source
succinate (C); with MOPS
-3.9
+0.1
-0.2
-0.0
+0.2
carbon source
Trisodium citrate (C)
-3.7
+0.1
-0.0
+0.0
-0.2
carbon source
succinate (C); with MOPS
-3.5
-0.1
-0.2
+0.0
-0.0
carbon source
succinate (C)
-2.9
-0.0
-0.2
-0.0
-0.7
carbon source
succinate (C)
-4.0
-0.1
+0.2
+0.1
+0.1
carbon source
Trisodium citrate (C)
-2.9
+0.3
-0.1
+0.1
-0.3
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