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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS20500 and PFLU_RS20505 are separated by 107 nucleotides
PFLU_RS20505 and PFLU_RS20510 are separated by 11 nucleotides
PFLU_RS20510 and PFLU_RS20515 are separated by 65 nucleotides
PFLU_RS20515 and PFLU_RS20520 are separated by 41 nucleotides
PFLU_RS20500: PFLU_RS20500 - tRNA-Val, at 4,617,276 to 4,617,351
_RS20500
PFLU_RS20505: PFLU_RS20505 - SDR family oxidoreductase, at 4,617,459 to 4,618,223
_RS20505
PFLU_RS20510: PFLU_RS20510 - O-succinylhomoserine sulfhydrylase, at 4,618,235 to 4,619,446
_RS20510
PFLU_RS20515: PFLU_RS20515 - amidophosphoribosyltransferase, at 4,619,512 to 4,621,017
_RS20515
PFLU_RS20520: PFLU_RS20520 - colicin V production protein CvpA, at 4,621,059 to 4,621,616
_RS20520
Group
Condition
PFLU
_RS20500
PFLU
_RS20505
PFLU
_RS20510
PFLU
_RS20515
PFLU
_RS20520
carbon source
NAG (C); with MOPS
N.D.
-0.2
-5.2
-2.2
-1.6
carbon source
D,L-Lactate (C)
N.D.
+0.1
-4.6
-4.3
-0.3
carbon source
acetate (C)
N.D.
-0.8
-4.2
-1.8
-2.3
carbon source
NAG (C); with MOPS
N.D.
-0.3
-5.2
-2.2
-1.2
carbon source
NAG (C); with MOPS
N.D.
+0.0
-5.0
-2.2
-1.5
carbon source
NAG (C)
N.D.
-0.2
-4.3
-3.8
-0.5
carbon source
D,L-Lactate (C)
N.D.
+0.0
-4.1
-4.1
-0.4
carbon source
NAG (C)
N.D.
-0.1
-3.7
-3.5
-0.8
carbon source
acetate (C)
N.D.
-0.0
-3.3
-3.8
-0.7
carbon source
acetate (C)
N.D.
-0.5
-4.0
-1.7
-1.6
carbon source
D-Glucose (C)
N.D.
+0.1
-3.3
-2.1
-2.4
carbon source
acetate (C)
N.D.
-0.1
-4.6
-1.8
-1.1
carbon source
D-Xylose (C)
N.D.
-0.2
-3.3
-3.6
-0.4
carbon source
succinate (C); with MOPS
N.D.
+0.1
-3.7
-2.1
-1.8
carbon source
L-Arabinose (C); with MOPS
N.D.
+0.0
-3.5
-1.8
-2.2
carbon source
acetate (C)
N.D.
+0.0
-2.5
-4.0
-0.7
carbon source
L-Arabinose (C); with MOPS
N.D.
-0.2
-3.0
-2.2
-1.8
carbon source
succinate (C); with MOPS
N.D.
+0.2
-3.3
-2.2
-1.7
carbon source
D-Xylose (C)
N.D.
-0.1
-3.3
-3.4
-0.3
carbon source
L-Arabinose (C)
N.D.
+0.2
-3.8
-2.1
-1.3
carbon source
L-Arabinose (C); with MOPS
N.D.
+0.2
-2.8
-2.2
-1.8
carbon source
Trisodium citrate (C)
N.D.
+0.3
-3.5
-2.2
-1.2
carbon source
Trisodium citrate (C); with MOPS
N.D.
-0.0
-3.7
-2.0
-0.8
carbon source
L-Arabinose (C)
N.D.
+0.1
-2.9
-2.0
-1.7
carbon source
Trisodium citrate (C)
N.D.
-0.1
-3.0
-2.1
-1.3
carbon source
Trisodium citrate (C); with MOPS
N.D.
+0.0
-3.4
-2.1
-0.9
carbon source
succinate (C); with MOPS
N.D.
+0.4
-3.0
-1.9
-1.9
carbon source
D-Glucose (C)
N.D.
+0.1
-1.3
-1.9
-2.8
carbon source
Trisodium citrate (C); with MOPS
N.D.
+0.3
-2.6
-2.1
-1.2
carbon source
succinate (C)
N.D.
+0.2
-2.8
-2.0
-0.9
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