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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS20275 and PFLU_RS20280 are separated by 89 nucleotides
PFLU_RS20280 and PFLU_RS20285 are separated by 90 nucleotides
PFLU_RS20285 and PFLU_RS20290 overlap by 20 nucleotides
PFLU_RS20290 and PFLU_RS20295 are separated by 3 nucleotides
PFLU_RS20275: PFLU_RS20275 - integrase, at 4,583,910 to 4,584,113
_RS20275
PFLU_RS20280: PFLU_RS20280 - tRNA-Pro, at 4,584,203 to 4,584,279
_RS20280
PFLU_RS20285: PFLU_RS20285 - MerR family transcriptional regulator, at 4,584,370 to 4,584,726
_RS20285
PFLU_RS20290: PFLU_RS20290 - integration host factor subunit alpha, at 4,584,707 to 4,585,009
_RS20290
PFLU_RS20295: PFLU_RS20295 - phenylalanine--tRNA ligase subunit beta, at 4,585,013 to 4,587,391
_RS20295
Group
Condition
PFLU
_RS20275
PFLU
_RS20280
PFLU
_RS20285
PFLU
_RS20290
PFLU
_RS20295
carbon source
acetate (C)
-0.0
N.D.
-2.0
-3.8
N.D.
carbon source
acetate (C)
+0.0
N.D.
-1.7
-3.7
N.D.
carbon source
acetate (C)
-0.4
N.D.
-1.9
-2.8
N.D.
carbon source
L-Arabinose (C)
+0.1
N.D.
-2.3
-1.4
N.D.
carbon source
L-Arabinose (C)
-0.2
N.D.
-4.0
+0.7
N.D.
carbon source
NAG (C)
+0.1
N.D.
+0.1
-3.6
N.D.
carbon source
NAG (C); with MOPS
+0.2
N.D.
-0.5
-3.1
N.D.
carbon source
L-Arabinose (C); with MOPS
-0.2
N.D.
-2.9
+0.1
N.D.
carbon source
NAG (C); with MOPS
+0.2
N.D.
-1.2
-1.5
N.D.
carbon source
L-Arabinose (C)
+0.2
N.D.
-2.6
+0.0
N.D.
carbon source
succinate (C)
+0.0
N.D.
-1.1
-1.2
N.D.
carbon source
Trisodium citrate (C); with MOPS
+0.0
N.D.
-1.2
-1.1
N.D.
carbon source
L-Arabinose (C); with MOPS
+0.1
N.D.
-2.0
-0.1
N.D.
carbon source
acetate (C)
+0.2
N.D.
+0.0
-2.2
N.D.
carbon source
NAG (C)
-0.0
N.D.
+0.3
-2.2
N.D.
carbon source
succinate (C)
+0.0
N.D.
-0.8
-1.0
N.D.
carbon source
Trisodium citrate (C)
-0.1
N.D.
-1.2
-0.5
N.D.
carbon source
D-Glucose (C); with MOPS
-0.2
N.D.
-0.9
-0.6
N.D.
carbon source
Trisodium citrate (C)
+0.0
N.D.
-0.5
-1.1
N.D.
carbon source
acetate (C)
-0.0
N.D.
+0.1
-1.6
N.D.
carbon source
succinate (C); with MOPS
-0.0
N.D.
-0.6
-0.9
N.D.
carbon source
D-Glucose (C); with MOPS
+0.1
N.D.
-0.7
-0.8
N.D.
carbon source
D-Xylose (C)
-0.0
N.D.
+0.1
-1.3
N.D.
carbon source
succinate (C); with MOPS
+0.1
N.D.
+0.0
-1.4
N.D.
carbon source
succinate (C)
+0.0
N.D.
-0.6
-0.5
N.D.
carbon source
D-Glucose (C)
+0.1
N.D.
-0.5
-0.6
N.D.
carbon source
D,L-Lactate (C)
+0.0
N.D.
+0.1
-1.1
N.D.
carbon source
Trisodium citrate (C)
-0.0
N.D.
-1.2
+0.4
N.D.
carbon source
NAG (C); with MOPS
+0.2
N.D.
-1.1
+0.3
N.D.
carbon source
L-Arabinose (C); with MOPS
+0.0
N.D.
-1.5
+0.9
N.D.
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