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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens SBW25
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFLU_RS19345 and PFLU_RS19350 are separated by 179 nucleotides
PFLU_RS19350 and PFLU_RS19355 are separated by 194 nucleotides
PFLU_RS19355 and PFLU_RS19360 are separated by 1 nucleotides
PFLU_RS19360 and PFLU_RS19365 are separated by 0 nucleotides
PFLU_RS19345: PFLU_RS19345 - methyl-accepting chemotaxis protein, at 4,374,504 to 4,376,129
_RS19345
PFLU_RS19350: PFLU_RS19350 - Lrp/AsnC family transcriptional regulator, at 4,376,309 to 4,376,791
_RS19350
PFLU_RS19355: PFLU_RS19355 - 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha, at 4,376,986 to 4,378,221
_RS19355
PFLU_RS19360: PFLU_RS19360 - alpha-ketoacid dehydrogenase subunit beta, at 4,378,223 to 4,379,281
_RS19360
PFLU_RS19365: PFLU_RS19365 - 2-oxo acid dehydrogenase subunit E2, at 4,379,282 to 4,380,541
_RS19365
Group
Condition
PFLU
_RS19345
PFLU
_RS19350
PFLU
_RS19355
PFLU
_RS19360
PFLU
_RS19365
carbon source
L-Arabinose (C)
+0.0
+0.2
-0.4
-0.3
-0.5
carbon source
acetate (C)
-0.1
-0.2
-0.1
-0.3
-0.2
carbon source
succinate (C)
-0.1
-0.1
-0.2
-0.1
-0.2
carbon source
NAG (C); with MOPS
-0.1
-0.1
-0.1
-0.1
-0.1
carbon source
NAG (C); with MOPS
+0.2
-0.2
-0.1
-0.2
-0.2
carbon source
L-Arabinose (C); with MOPS
-0.2
+0.1
-0.2
-0.2
+0.1
carbon source
acetate (C)
+0.1
+0.0
-0.1
-0.1
-0.3
carbon source
acetate (C)
+0.1
+0.1
-0.2
+0.0
-0.4
carbon source
Trisodium citrate (C)
+0.0
+0.1
-0.1
-0.1
-0.2
carbon source
succinate (C)
-0.0
+0.1
-0.2
-0.3
+0.1
carbon source
L-Arabinose (C)
+0.1
+0.1
-0.2
-0.1
-0.2
carbon source
Trisodium citrate (C); with MOPS
+0.0
-0.1
-0.2
-0.0
+0.1
carbon source
succinate (C); with MOPS
+0.1
-0.1
-0.1
-0.1
+0.2
carbon source
D,L-Lactate (C)
+0.0
-0.2
-0.0
+0.2
-0.1
carbon source
D,L-Lactate (C)
-0.1
-0.2
+0.1
+0.1
-0.0
carbon source
Trisodium citrate (C); with MOPS
-0.0
+0.2
-0.1
-0.0
-0.1
carbon source
succinate (C)
+0.0
-0.0
-0.1
+0.1
-0.0
carbon source
L-Arabinose (C); with MOPS
+0.1
-0.1
-0.1
-0.2
+0.3
carbon source
D-Glucose (C); with MOPS
+0.1
+0.2
-0.1
-0.1
+0.0
carbon source
L-Arabinose (C); with MOPS
-0.1
+0.3
-0.1
+0.0
-0.0
carbon source
D-Glucose (C)
-0.1
+0.1
-0.1
+0.0
+0.1
carbon source
NAG (C); with MOPS
-0.0
+0.1
-0.1
-0.1
+0.2
carbon source
Trisodium citrate (C); with MOPS
-0.1
+0.3
+0.0
+0.1
-0.1
carbon source
Trisodium citrate (C)
+0.1
+0.1
-0.1
+0.0
+0.1
carbon source
D-Glucose (C)
+0.1
-0.1
-0.1
+0.1
+0.2
carbon source
L-Arabinose (C)
+0.2
+0.2
+0.0
-0.0
-0.1
carbon source
D-Xylose (C)
-0.0
-0.0
+0.1
+0.2
+0.1
carbon source
D-Glucose (C)
+0.2
+0.1
+0.1
-0.0
+0.1
carbon source
acetate (C)
+0.0
-0.0
+0.4
+0.4
+0.2
carbon source
acetate (C)
+0.1
+0.1
+0.5
+0.6
+0.5
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